Names & Information

Knowledge of BnaC09G0449300ZY:

Gene Name
BnaC09G0449300ZY
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
BnaC09g41540D [Brassica napus]
Best Hit (SwissProt)
Protein PHLOEM PROTEIN 2-LIKE A8 OS=Arabidopsis thaliana GN=PP2A8 PE=2 SV=1
NT seq
Len:1173 nt

ATGGAGAGGACTAATCCGCACCTTCAAGTTTTCATCAGTTTCCGTGGTAAAGACGTTCGCGGCAACATCCTCAGCTCCTT
GAAAGAAAAATTGAAAGATGAAGGCGTCAACGTGAAGACGGACGAGGAAATGCCTAGAGGAAGAAAGATCGATGAGAATC
TACTAAAGCTGATAAGAGACTCGAAAGTGGCGGTGGTGATCTTCTCAGAGAACTATCCAGAGTCAACTTGGTGCTTGGAC
GAGCTAGTGGAGATCAAGAAGCAAATGGAGCTAAAGAAGCTTGCTCCTCTTCCCATCTTCTTCGAGGTTAAAGCCTCACA
CGTAGCACTTAAGGAACATAATCCTTTCAAAGACATTCTACTGCGGTTGGAAGACGACGAAAGAGAAAATGCCAGAAACG
GTTCTAGGGTGGGCTCCGGAAGGATGCACTGTTGGTCCTGTTTCCTGAGCCGGCGCTTGTTAAAAGATGCAGACAAGAGG
TTTGTCAGGTGGCGGGAAGCTTTGAAATCTATAACGGGTTATTCGGGCTTGAAGTATATAAAGGACAGCAACCAAGCCCT
CTTTGTCAACCAAATCGTGGAGACTGTGAAGGAAATGTTAGACAAAGTACAATCATCAGATGAAGTGCATGGCCGGATCA
GGGGACAACATATTGTGCCACAACAAAAAGTGTTCATCAGTTTTGGGGGTCATGGTGATGACACCCGCCTTGGTTTCATT
TCTCATTTCCAAGCTGGCTTGAAAAGAAGTGGAATCAACTTTTACATAAATATTGAAAACATGACTAAAGGATATGACCC
CGAAGAGCTTATCATGAATGTCCGAGAGTCGAGGATAGCGCTTGTGATCTTCACTGAGAGCTACTTGAGCTCTGCATGGT
GCTTGGAGGAGCTAGTGGAGATCAACAAATACACGATGAGTCTTGTAGTCATTCCAATATTCTACAAAGTGGAACCGAAA
TATGTAAGGGATGGGAGGCTAGTGGAGATCAACAACCAGCTAGTCTTGAATTGGGGAGCTACGGACGTCAGGATCAACAG
ATGGAAGCAGGCTCTTAACTCAGTTGGAGAGAGGTTAGGTTTTGTGTATGCAAACCCAAGCTCGGAGGCAGAATTCGTTG
AATATATCATCTGTGAAACTAAGCGGACGTTAGCCAATACTTCATCCAGCTAA
AA seq
Len:391 aa

MERTNPHLQVFISFRGKDVRGNILSSLKEKLKDEGVNVKTDEEMPRGRKIDENLLKLIRDSKVAVVIFSENYPESTWCLD
ELVEIKKQMELKKLAPLPIFFEVKASHVALKEHNPFKDILLRLEDDERENARNGSRVGSGRMHCWSCFLSRRLLKDADKR
FVRWREALKSITGYSGLKYIKDSNQALFVNQIVETVKEMLDKVQSSDEVHGRIRGQHIVPQQKVFISFGGHGDDTRLGFI
SHFQAGLKRSGINFYINIENMTKGYDPEELIMNVRESRIALVIFTESYLSSAWCLEELVEINKYTMSLVVIPIFYKVEPK
YVRDGRLVEINNQLVLNWGATDVRINRWKQALNSVGERLGFVYANPSSEAEFVEYIICETKRTLANTSSS*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0005515
Pfam
TIR domain
KEGG
hypothetical protein; K04646 clathrin heavy chain (A)