Names & Information
Knowledge of BnaC09G0455800WE:
| Gene Name | BnaC09G0455800WE |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 isoform X2 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:3666 nt ATGGCTTCTTCTTCTTCTCTCACTTGGACGCATGATGTCTTCCCGAGCTTCTGTGGAGGAGACGTGCGCAAAGGCTTTCT TAGTCACCTTCTGAAAGAGCTCGAAAGCAAAGGAATCAAAACTTTCATCGATGACGGGATCGATCGAGGCAAACCTATCG GCCCCGAGCTGGTAAAAGCGATCAGAGAATCAAGGATTGCCATTGTCTTGCTCTCCCCTGACTACGCTTCTTCAAGCTGG TGTTTGTATGAGTTGGTGGAGATAATGAAGGACAGGGTAAAGGAGCCATATGAGTTGGAGGAAAGCATGGAGGGCAGGGT AAAGGAGCCAGATGAGTTGGAGGAAATCATGGAGGGCAGCGAAAGGAATCAACTAAAAGTGATAACCATTTTCTATGGAG TGAATCCAACTGATGTTAGGAAGCAGACCGGAGATTTCGGAGAGGCCTTTAACATAACCTGTGTGGGAAAAGAAGAAAAG AAGGTGAAGGCATGGACACAAGCTTTGGTGGATGTAGCCAATATAGCTGGTTATGACTCTAGCAGATGGCACAGTGAAGC TGATTTGATCAACAAAATTGCCGTATATCTTATGAAAGTGTTGGGGCTTACACCATCAAAAGATTTTGATCACTTTGTTG GCATGGAAGCTCGTATCACGGAGATAAAGTGCTTGTTGAGCCAACAATCTGATGCCAAAGTTAAGTTCATAGGGATCGTG GGTCCTGCTGGGATTGGTAAGACGAGCACTGCCAGAGCTTTGTTCGACCGGTTCTCTCGTGATTTTAAGTACAGCACGTT TATTGAGGATATCAGAGGAAGTAAAGAGATGCCTGTTCTCGGTGGCTCCCATCATCAATTTCAGTTGGATTGGCAGAAAG AGTTACTGTCTCGGCTTTTCGACCAAACGGATAGTAAGGTTGGTCATTTGGGAGTGGCTGAACAAAGGCTGAGAGGCAAA AAAGTGTTGATTGTTCTTGATGAAATGGATTGCTTGTTCAAACTAGAGGCAATGGCAAAAAAGGCTGATTGGTTTGGACC CGGAAGTGTTATTATCATTACAACCGAAGATAGAAAACTTCTCAAGGCACAAGACATCAAATGTATTTACAATATGAGAC TTCCAAATCAAGTTGAGGCAATGCAGATCTTATGCCAATATGCTTTCGTTCACAAGTCTCTAGATTATGGTCCTGCGACG ATAATTGCCAGAGCTTTGCACAACCAATACTCTCTTGATATCAGAGGATTTGAGATCTTCTGCCAATATGCTTTCGATCA AAAGTCTCTAGATTATGGTCCTGAGATGAGAACTGTCAAACCTTTGCGAAACCAATTCTATCTTGATATCAGGAAAAGTA TTGAGATGTCCTCTCTCCCTGGCTCCGATTATATATATCAGTTGGATTATCTGTATGATTTTTATAAGCTGGCTCAGGAA GTTACTAAACTTGCTGGTCGTCTTCCTCTGGCCCTGAGAGTCTTGGGATCGTCTCTACGAGGAATGTCCAGGGACGAGTG GAGAAATGCAGTACCAAGGCTCAAGTCTAGCCTTGACGAAGGAATTGAATCAATTCTAATGTTTGGCTACAACGGCTTAC CTTGTGATAAAGACAGAACTCTTTTTCTGTATATTGCATGTTTCTGTGTTGGTTTCAAAGTTGATCGCCTTAAAAGTCTT CTTGAAGATTGTGATTTGGATGTCGGCCATGGGCTTCATAACTTGGAGCAGAAAAGTCTCATATACACAGAATCCGGATA CGATCCATACAGATACGTAAAGATGCACAAATTACTGCAACAAATGGGTAGAGAAATTGTCAAGAAAGAGTCTTTGAAGG AGCCTGGAAAGCGACAGTTCTTGATGGATGCAAAGGATATTTCTGAATTACTTGAAGATGAAGATACTGGCACTGGAGAA ATTCTAGGCATAATGTTAGACAGATGGGGAAGGGAGGATATCCAAATAAGTAAAAGTGCCTTCAAAGGGATGAAGAATCT CCAGCTCCTAGTAATCGACTCTAATACCGTGCGCATACCTGAAGGCCTCAACTGTCTTCCCGACAAACTCAGACTTCTAG AGTGGCCCAGATGTCCATTGACATTTTTGCCTTCCAAGTTCTCTGGCAAGTTTCTTGTTGAACTTATCATGACAGACAGC AAACTTGAGAAGCTTTGGGATGGAATTAAGCCTCTCCAGCGACTCAAGCGGATGGTTTTGAGTAATTCTTGGTATCTGAA AGAGATTCCAGATCTCACAAATGCAACGAGTCTCGAGGAACTAGTTCTCTCTGAGTGCATACGTTTGTTAGAGCTCACAA GCACTATTGGCAATGCCACTAAGCTTAAAAGGTGCATACTTAGCCGTTGCTTTCTTTTGAAGGATCTCCCCTCTTCTATG AGTAGGTTAATCAATCTCGAGAAACTGGACCTCACTCAGTGCACGGGTTGGAAAGATGGTTGGTCAAGTCTGCAAAAACT CTGTGGTTGCTCGAGTTTGAAAGAAGCCGATCTGAGCTGGAGTGCGATATGGGAAGTGCCATCATCAATCAGATCTAATT GGCCTTGTCTTAAGAAATTGGATATGTCTGGGTGTAGAAACCTCAAGGAGTTCCCAAATGTTCCTGACAGCATTGAAGAG TTGGTATTGTGCAAGACAAGGATAAAGGAAATTCCTCCATCGATTGAGAATCTGTCTCGTCTGCGTAAACTAATTATGTT TGGATGCAAGAATCTGAAAAAGATATCTCCCAATATTTCTAAGTTGGAGAATCTTGAGTTTCTTGGTCTGCGAAAAAGTG GCCAAAGTGAGCATGATAAGGTGGATCTTATTGATGTATTTGAAGCAGTAATCAAGTGGGAGGGCCCTGACTCGAAGCGC AGTTGGAGATTACTATCAGACTTCGAAGTTCACTACCTTTTACCGAGATGTCTACCCACGAAGAAGGCGCTATCATTATG GTTACGGGGTTATGATATCTACACTATTTCAGATTGCATCACATGTCTCTCAGGGCTCATCAAGCTTGACGTCACAGAAT GCCCTTATCTCGAAGCACTTCCACCGCTTCCAGACTCACTTCTATATATAGATGCAGAAGACTGTTTATACTTGAAGAGA ATAGACTCTTCTTTTCATAATCCAAATATTTGCCTAAACTTTGCTGGCTGTTATGGCCTGAGTCGAAACGCGAGAAGGCT CATCCACACATCAGACTGCAAATATGTGTTATTACCGGGTGAAGAAGTGCCTGCACACTTCCCTCACCAAGCTGAGTCAG GTTCCCTGACAATCAATCTGACTCCAAGACCTCTTCCTTCATCCTTGAGATTCAAAGCTTGCATCTTGCTGTCAACATGC AATACTTCCATGTCTGTGGTTCTAATGATGGGTGGTGTGACTTGTCGTGTCATAGGTAAACAGAATGATCTCACTATGCA ATATGGATCAAATCAGCACCATATGCCGTGTAAACGTTTAGTCTATGAAGACCATCTGTATATATTTGAAGATTCTTTCT GTCTAAACCAGGATTTCCCTGATGAAGCCGGAGAAGCCACCTTGAGCGAGCTTCTGTTTGAGTTCCTGTTCCATGGTAAC ATCTGGAAGGTGAAAGGCTGCGGTGTACGACTTTTGTTCCCTGATTCTATTATTGACAGCCAATGA |
| AA seq | Len:1222 aa MASSSSLTWTHDVFPSFCGGDVRKGFLSHLLKELESKGIKTFIDDGIDRGKPIGPELVKAIRESRIAIVLLSPDYASSSW CLYELVEIMKDRVKEPYELEESMEGRVKEPDELEEIMEGSERNQLKVITIFYGVNPTDVRKQTGDFGEAFNITCVGKEEK KVKAWTQALVDVANIAGYDSSRWHSEADLINKIAVYLMKVLGLTPSKDFDHFVGMEARITEIKCLLSQQSDAKVKFIGIV GPAGIGKTSTARALFDRFSRDFKYSTFIEDIRGSKEMPVLGGSHHQFQLDWQKELLSRLFDQTDSKVGHLGVAEQRLRGK KVLIVLDEMDCLFKLEAMAKKADWFGPGSVIIITTEDRKLLKAQDIKCIYNMRLPNQVEAMQILCQYAFVHKSLDYGPAT IIARALHNQYSLDIRGFEIFCQYAFDQKSLDYGPEMRTVKPLRNQFYLDIRKSIEMSSLPGSDYIYQLDYLYDFYKLAQE VTKLAGRLPLALRVLGSSLRGMSRDEWRNAVPRLKSSLDEGIESILMFGYNGLPCDKDRTLFLYIACFCVGFKVDRLKSL LEDCDLDVGHGLHNLEQKSLIYTESGYDPYRYVKMHKLLQQMGREIVKKESLKEPGKRQFLMDAKDISELLEDEDTGTGE ILGIMLDRWGREDIQISKSAFKGMKNLQLLVIDSNTVRIPEGLNCLPDKLRLLEWPRCPLTFLPSKFSGKFLVELIMTDS KLEKLWDGIKPLQRLKRMVLSNSWYLKEIPDLTNATSLEELVLSECIRLLELTSTIGNATKLKRCILSRCFLLKDLPSSM SRLINLEKLDLTQCTGWKDGWSSLQKLCGCSSLKEADLSWSAIWEVPSSIRSNWPCLKKLDMSGCRNLKEFPNVPDSIEE LVLCKTRIKEIPPSIENLSRLRKLIMFGCKNLKKISPNISKLENLEFLGLRKSGQSEHDKVDLIDVFEAVIKWEGPDSKR SWRLLSDFEVHYLLPRCLPTKKALSLWLRGYDIYTISDCITCLSGLIKLDVTECPYLEALPPLPDSLLYIDAEDCLYLKR IDSSFHNPNICLNFAGCYGLSRNARRLIHTSDCKYVLLPGEEVPAHFPHQAESGSLTINLTPRPLPSSLRFKACILLSTC NTSMSVVLMMGGVTCRVIGKQNDLTMQYGSNQHHMPCKRLVYEDHLYIFEDSFCLNQDFPDEAGEATLSELLFEFLFHGN IWKVKGCGVRLLFPDSIIDSQ* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |