Names & Information
Knowledge of BnaC09G0486200ZS:
| Gene Name | BnaC09G0486200ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g40030D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:3363 nt ATGGTGAGTTCTTCCTCTTCCATGGTGAAAGCTGAAGCTGAGACACCCCAAGAGCAAGTGTTTATTAACTTCCGTGGAGT TGAACTGCGCTACAACTTCGTCAGCCATCTCACCAATAACTTAAAAAGGAATGGGATCAATGCCTTCATAGACACCGATG AGGATATGGGCAAAGAGTTGAATGTTCTGCTAAAGAGAATCGAAGAGTCAAAGATCGCACTCGCAATATTCTCGCCAAGG TATACGGAGTCGGATTGGTGTTTGAAAGAGCTTGCGAAAATGAAGGAAAGAAAGGACCAAAACATGCTCGAGGTGATTCC AATCTTCTACAAGGTGAAACCTGCCACTGTTAAAAGACAGATGGGCGAGTTCGGCGATAAGTTCAGGAATCTGGTGCGGT CTATAGACAAGGAGACAAGCAACAAATGGAGTGAAGCTTTGGAAGATGTCCCTCTCTTAATGGGTTTCGAGGTGGACGAG AAAAGACTCATCAAGAGAGTCGTCAAGGAGGTGAAGAAAGTGCTGATGAAAACCCTTGCACATGCTTCTCCCAATCCCCA AAAATGTATTGCGCCGTCGTCGCCACCACAAAGAAACCAGAAAAGCCATGAAAGCTCTTGGGGAATCGAACAACGACTTA AGCAACTAGAAGAAAAGTTAAGCCACCCTCGCTACAAGGAAACAACTCGTATCATTGGTGTTGTTGGGATGCCCGGCATA GCTTATAAAGATCAACTACTCAAGACCAAAGTCTTGGTTGTTCTCGACAATGTCAGTAACAAGGAACAAATTGATGTTCT TCTTGGCGAACGCGACTGGATTGCCAAGGGAAGCAAGATTGTCATTTCAACAACCGATATATCACTGACACACAATTTGG TCAGTGATATATACGAGGTTCCTCCACTAAGCGACAGAGACGCCTTACAACACTTTATTCATTATGCATTTGATGATCAA GAAGACATTGCACTCAGGCTAGGAATTTTCTCCAAGTTGTTGAAAGATTTCGTGCATTATACAAAAGGAAATCCACTAGC TCTCAGGATATTGGGTAGAGAGCTTTCGGGGAAAGATGAGACTATCTGGGAATCAAAACTAGCTGCACTGACTCAGCATC ATAATAGCCCACCAGGAAAAAACACCAGCATGATGCTTCAAAGGGTATGGAAAGGTACTTATGATGGGCTGAGTCAAAAT CAAAAAGATACGCTCCTTGACATAGCTTGCTTCAGGTCGCTAGATGAGAATTACGTTGCCAGTTTATTGGATGCACATGG TCCATGTTCCTCTGATGCTAGGAATGTCGACATAGCAGATCTCGTGAACAAGTTTATGATTAATATTTCTTCTGGCAAAG TAGAGATGCACGATACGCTCTACATGCTCTCCAAAGAACTTGGTCAAGACGCTTCTGCTCTCGACGGGAAGGGGCGACGA AGATTGTGGCACCATCACACGATAATTGATGTTATAGACAAAAATAAGGGAGCTTCTAAATTGAGATCTATCCTCCTTGA CTTGTCTGAGGTAAAGAGAAAAACAAGCTTCCAGAGCCAAGCTTTTGCCGGGATGAGTGATCTACGATATCTCAAAATCT ACAGCTCTAAGTGTCCTCAAGAATGTGATCGTGACAATAAACTAAACTTCCCAGACGGACTCCAGCTACCATTGAGTGAG GTTAGATGTTTCCATTGGTTGAAATTCCCATTGAAAGAAGTTCCAGAAGATTTCAACCCGGAGAATTTGGTTGATCTTAA GCTTCCTTACAGCGAGATTGAACGAGTCTGGGAAGATAACAAGGACGCATCAAAACTAAGATGGGTCGATTTGAACCATT CACGGAAGTTGAGCATTTTGTCGGGTTTAGGAAAGGCTCAAAGTATTGAATACCTGAATCTTGAAGGTTGTACGGCGTTG ACAAGGTTGCATGAGAATATGGAGGATATGAAGTGTCTTGTTTTCTTGAACCTGAGAGGATGCACGAGTCTCAAGTCTCT TCCATTGATTAAATTAATCTCTTTGAAAACGCTCATCCTCAGCGGCTGCTCGAAGTTTAAAGCATTTCACGTTATTTCTG ATAAGCTTGAAGCTCTCTACTTGGACGGCACAAAGGTAAACGAACTTCCTGTTGAAATTGGGGTCCTCCAAAGACTTGTC TTACTGAACATGAAAGACTGCAAGAAGCTGAAAAAACTCCCTTGCAGTCTTCATGACCTGGAAGCTCTAGAACAACTTAT ACTCTCGGGTTGTTCAAAGCTCAAAGAGTTTCCAGAAACTGGAGGACACGTGAGCAGTTTAGAGATTCTGCTTCTGGATG GGACGGCCATAAAGGACATACCAGATATTTTCTCGGTGCGGCGTTTATGCTTAAGCTGGAATGTAAAGATCAGCCGCCTT CCCGACCTAATCAGTCGATTTTTACGACTGCAATCGCTTGATTTGAAGCACTGTAAGAATCTTACACATGTTCCTCAGCT TCCACCAAATCTTCAGTGCTTAGATGTACGTGGCTGCAGCTCACTGAAAACAATTGCAAAACCACTGGTATGTTCTGTGC CGACGGGTCAGATCCATTCCAAGTTCATTTTCACAAACTGCAATGAACTGGAAAAAACTGCAAAGGAGGAGATAGCAGCC TATGCTGAAAGGAAGTGTCAATTGGTATCAAGTGCACTTAAGCGCTGCAATGGGGGTTGTGTTCCTGATATTGTGTTTGA CACTAGCTTTCCTGGATGTGAAATGCCTTCATGGTTTTGTCATGAAGCAATTGGATCTCTGGTGGAGTTTGAATTGCCCC CACATTGGGATCACAACAGGCTTTCAGGGATAGTCCTATGTGTTGTTGTCTCTTTTAAGAACTGTCAAGATCATGCCGAC ATGACAGTCAAATTCACTGGAGAGGGCTCTTGCACGAGCATTACTTGGAAGGTTGGAAGTTTGATTGAACAAGACAATGA GGTAGACACAGTTGAGTCAGATCATGTATTAATCGGCTACACCACCAACTGTCTAAACTTCAGAAAACTTCTTCAATGTC ATGACCCGCGTAAATGTGCTCCGACAAAGGCATCCCTTGAGTTTAGCGTGACAACTGGTACTGGTGGGGAAGCGAGCTTT GAAGTTTTGAGATCTGGTTTCAGTTTTGTGTTTGAACCTGAAGAGATCAAAGTTCCACCCCCAAGAAGTGAACAATTCAA AGGTAAAACTAAAAATAACGGAACTCTAGATAGTAATGGTAGTTTCAAGGATCAACCAAAAGGACATGAATCTCCAAAGG GCCACTTTGAGTCTTGCACCGGAAGTTGCACCACATGTGAAGCACATTGTCACGGACTGATTTCTGAGGACGTGCGGCCT TAG |
| AA seq | Len:1121 aa MVSSSSSMVKAEAETPQEQVFINFRGVELRYNFVSHLTNNLKRNGINAFIDTDEDMGKELNVLLKRIEESKIALAIFSPR YTESDWCLKELAKMKERKDQNMLEVIPIFYKVKPATVKRQMGEFGDKFRNLVRSIDKETSNKWSEALEDVPLLMGFEVDE KRLIKRVVKEVKKVLMKTLAHASPNPQKCIAPSSPPQRNQKSHESSWGIEQRLKQLEEKLSHPRYKETTRIIGVVGMPGI AYKDQLLKTKVLVVLDNVSNKEQIDVLLGERDWIAKGSKIVISTTDISLTHNLVSDIYEVPPLSDRDALQHFIHYAFDDQ EDIALRLGIFSKLLKDFVHYTKGNPLALRILGRELSGKDETIWESKLAALTQHHNSPPGKNTSMMLQRVWKGTYDGLSQN QKDTLLDIACFRSLDENYVASLLDAHGPCSSDARNVDIADLVNKFMINISSGKVEMHDTLYMLSKELGQDASALDGKGRR RLWHHHTIIDVIDKNKGASKLRSILLDLSEVKRKTSFQSQAFAGMSDLRYLKIYSSKCPQECDRDNKLNFPDGLQLPLSE VRCFHWLKFPLKEVPEDFNPENLVDLKLPYSEIERVWEDNKDASKLRWVDLNHSRKLSILSGLGKAQSIEYLNLEGCTAL TRLHENMEDMKCLVFLNLRGCTSLKSLPLIKLISLKTLILSGCSKFKAFHVISDKLEALYLDGTKVNELPVEIGVLQRLV LLNMKDCKKLKKLPCSLHDLEALEQLILSGCSKLKEFPETGGHVSSLEILLLDGTAIKDIPDIFSVRRLCLSWNVKISRL PDLISRFLRLQSLDLKHCKNLTHVPQLPPNLQCLDVRGCSSLKTIAKPLVCSVPTGQIHSKFIFTNCNELEKTAKEEIAA YAERKCQLVSSALKRCNGGCVPDIVFDTSFPGCEMPSWFCHEAIGSLVEFELPPHWDHNRLSGIVLCVVVSFKNCQDHAD MTVKFTGEGSCTSITWKVGSLIEQDNEVDTVESDHVLIGYTTNCLNFRKLLQCHDPRKCAPTKASLEFSVTTGTGGEASF EVLRSGFSFVFEPEEIKVPPPRSEQFKGKTKNNGTLDSNGSFKDQPKGHESPKGHFESCTGSCTTCEAHCHGLISEDVRP * |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |