Names & Information
Knowledge of BnaC09G0488400ZS:
| Gene Name | BnaC09G0488400ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g40250D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1 |
| NT seq | Len:1779 nt ATGGCCTCGGCGATTGTTCCGTCGCTCAGGCTGAGTCCCAGTTTATCCGACGCCACGTCACCATCGTCTCCCTCTTCCTC CGGCGACGATTTAGGGGCAATTCAGGAGACTACAGGAAGCTGGAGTACGGAAACGCTGATATCTCCTTTGTTGTTCACAC TGGACCACCACCCAGAGGGCTATCATGGGTTGATCAAACAAGAGGTCTTCTCCATTACGTCGAAGAGCACTGTGCAAAAA CTGTTTACACTCCTTGAGCTGTATTGCCGGGAGTCTATAGGTAGATACATTCGTGGAGCTCCTTTAGTGGACAAGGCAGA TGCAAATCTTGATTCTGATGAATCGATCTCAGCGCTTACTATAGCATTGGTTTCTTCAGGGCCTAGTTTGCGTGCTCGTT TTGTAGGGCAAGGATATAAGCATGTTTGTGGAAGAGCTGACATGTGGTACCTGAGGTTTCAGCTCATCTTGAAGGTGCAC TTAATCTTAGCTTCAACGGTTGACAAGAAGAAGGTGAAGAAATGGAAAGAAGCTTTGACGATACTAGCTGCTATTTCTGG TGAAGATTCTCGGAATTGGAGGGATGAGTCAAAGCTGATTAAGAAGATCGTTAAAGACATTTCTGATAAACTGGTTTTCA CTTCATTGGATGATTCAAAAGGGTTGATTGGAATGAGTTCCCATATGGACTTTCTGCAGTCTATGATGTCTATAGAGGAC GAAGATGTTCGAATGGTAGGGATTTGGGGAATGGGTGGAGTTGGGAAAACTACGATTGCTAAATACTTATACAGTGGACT CTCATGTCGATTCCAAGCTCATTGCTTCATAGAGAATGTGAAGGAAGTCTATAACAGATATGGAGTTAGGCATTTTACAA GGAGAGTTTCTATGCAGAATGTTTGGAGAGCTTTCGAGGGATTGTCTAATCTCAAGCTTCTCAACTTCTATGACCTTGCA TATAACGGAGAGACCAGAATGCATCTACCTGATGGCCTAAGTTATCTCCCACGCAAGCTTCGTTCTCTACACTGGGATGG ATACCCTTTAAAGTCTATGCCTTCAAGATTTCATCCGGAGTTTCTTGTTGAATTTTGTATGAGTAATAGCCATCTCCAAA AACTTTGGAACGGAGTCCAGAGCTTTCCACCAGAAATATGCCAGACAATGAGATGCTTGAGGTGGCTTGATTTAGAAGGG ACCGGTATTAAAGAACTGCCTGAAAACAATGGTAATTTGATAGCCCTCAAGGTGCTTCAAGCTAGAAGAACAGCGATAAG ACGAGCACCACGGTCAATTGCGCTACTTACCCGTCTTCAAGTTTTAGCAATTGGGGATAGCTTCTATGTTTCAGAAGGTT TACATTCTCTATGTCCTCGCTTATCAAGTTTTGATGACTTGAGAGTTCTGTGTCTAAGCAACATGAACATGACAGAGATT CCTAACAGTATTGGTGACTTATGGAGTCTATCAGAACTTGATTTGAGTGCGAGCAACTGTTACAAACTGGATCAAGAGGC ACAGAGTCTCATTCACCGTAACGTGCAGCTAGACTCAGCAAGACCAGAACACTTGTACTTTCCTGGAAGAGATGTGCCAT CTTGCTTCAGTCACCAAACCATGGGACCTTCGCTAAGAATACACGTGCCTCAGAGTCAATCATCATCTGATATTCTGGGA TTTTCCACCTGCATCATGATTGGAGGCAATGGGCAGTGCTCCATGAACGATGTCAAGATACGTTGTTCTTGTATTTTAAA AGGAGTTGATGCTAAATAG |
| AA seq | Len:593 aa MASAIVPSLRLSPSLSDATSPSSPSSSGDDLGAIQETTGSWSTETLISPLLFTLDHHPEGYHGLIKQEVFSITSKSTVQK LFTLLELYCRESIGRYIRGAPLVDKADANLDSDESISALTIALVSSGPSLRARFVGQGYKHVCGRADMWYLRFQLILKVH LILASTVDKKKVKKWKEALTILAAISGEDSRNWRDESKLIKKIVKDISDKLVFTSLDDSKGLIGMSSHMDFLQSMMSIED EDVRMVGIWGMGGVGKTTIAKYLYSGLSCRFQAHCFIENVKEVYNRYGVRHFTRRVSMQNVWRAFEGLSNLKLLNFYDLA YNGETRMHLPDGLSYLPRKLRSLHWDGYPLKSMPSRFHPEFLVEFCMSNSHLQKLWNGVQSFPPEICQTMRCLRWLDLEG TGIKELPENNGNLIALKVLQARRTAIRRAPRSIALLTRLQVLAIGDSFYVSEGLHSLCPRLSSFDDLRVLCLSNMNMTEI PNSIGDLWSLSELDLSASNCYKLDQEAQSLIHRNVQLDSARPEHLYFPGRDVPSCFSHQTMGPSLRIHVPQSQSSSDILG FSTCIMIGGNGQCSMNDVKIRCSCILKGVDAK* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | uncharacterized protein At2g41620-like; K14309 nuclear pore complex protein Nup93 (A) |