Names & Information
Knowledge of BnaC09G0516300WE:
| Gene Name | BnaC09G0516300WE |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaCnng38210D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1 |
| NT seq | Len:2658 nt ATGGATTCTTCTTTTTTCCTTACCACTGTTGCTGCTGCAGTAGGGCTCTTTACACTTTTGAGAAAACTCAGAATCCACAA GGACAACGTTGAAAAAGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTATTCTTCATCATCAGTTCTTCCACCTTCTTCTC CTTCTCGTATCTGGACACATCATGTCTTTCCTAGCTTCCGCGGGGAAGATGTCCGCAGAGACTTCCTCAGTCATATTCAG ATGGAGTTGCAAAGAAAAGGAATCACTCCTTTCGTTGATAATGAAATCAAAAGAGGAGAATCTATCGGTCCCGAGCTCAT TAAAGCCATTAGAGGATCCAAGATCGCTATTATCTTGCTCTCTAGAAACTATGCATCCTCTAAATGGTGTCTTGATGAAC TGGTGGAGATTATGAAGTGTAGGGAAGAGTTTGGTCAAACTGTAATGGCTATTTTCTATAAAGTGGATCCATCTGATGTT AAAAAGCTGACCGGAGATTTTGGGAAAGGTTTTGGAAGAACTTGTGCTGGTAAAACAAAAGAGGACATTGGGAGAGGGAG AGAAGCTTTGGCAAAAGTGGCTACAATAGCTGGTTATCATTCAAGCAACTGGGATAATGAAGCGGCCATGATCGAGAAAA TCGCCACTGATATTTCCAACATGCTGAATAATTTCACACCATCAAGTGATTTCGAGGAATTAGTTGGAATGAGAGCTCAT TTGGAAAAGATGGAACCATTGCTGTGCCTAGACTCAGATGAAGTGAGGATGATTGGGATTTGGGGTCCTCCTGGGATTGG GAAGACCACAATCGCCAGAGTCGCATACAACCAACTCTCCAACAGTTTTCAACTGAGTGTCTTTATGGACAACATCAAAG CAATCTGTTCAAGACCATGTTCCGATGACTACAGCGCAAAGTTGCAGTTACAACAACAGTTCATGTCTCAAATAACCAAC CATAAGGATATGGTGGTTTCTCATTTGGGAGTTGCCTCAAATAGGTTGAAAGACAAGAAAGTTCTTGTTCAAGAGTGGAC AAGGTCTCTACCAAGACTGAAGGCTAGCCTTGGCGCTGATATTCGAAGCAAGATTCGTAAAGTAGAAGAACATCTTACAA AGAAGTTCTTGGAAGTGAGGCAAAGACTTAACGTCTTAGCTGAGAAATCTCTCGTATCTATCGACTCCGGATATATAACA ATGCACAGTTTGCTACAAAAACTAGGCAGAGAAATTGTTTGTAGACAATCTATCCATGAGCCTGGACACCGCCAGTTTCT GTACAATAAAAGAGAGATTTGTGAAGTACTGATTGGTGATGAAACAGGTAGTAAAAGTGTCATAGGCATACAGTTTGACC GCAACGGAATCAAGGAGAAATTAGATATTAGTGAGAAAGCCTTTGAAGGAATGTCTAATCTCGAATTCTTAAAAGTCTAT GGTTATCATGATACAATGCAATTAAATCGAAGTCTGAACTATCTGTCTCATAAACTTCGATTACTACATTGGAGTCATTT TCCAATGACATGTCTTCCTTGTACTGTGAACTTGAAGTTCCTCGTGGAACTAATCATGGATCACAGCAAGCTTGAGAATT TGTGGGAAGGAAAAAAAAGTAATCTGAAGTGGATGGATTTGAGTTATTCTGTAAACTTGAAGGAGCTCCCCGATCTCTCA ACTGCCACTAACCTTGAGAAATTGTATCTGAATGATTGCTCCAGCTTGGTGAAGCTTCCTTGCACTAATGGGTATACCAA TAATCTTGAGAAGTTGGATCTTCGTAATTGCTCGAGTCTTATCGAGCTCCCTTGGTCTTTTGGTAATTCCACTAAGCTCG AGAAACTATATCTTGAAGGATGCTCTAAGTTGGAGGTTATTCCCACTAACATCAACTTGGAATCTTTGGATATACTTAAT CTCAGAAACTGCTCCATGCTGAAAAGTTTTCCTCAGATATCCACAAACATTAGACATCTCGACCTCACAGGAACTGCAAT AGAAGACGTGCCTCCCTCCATCAGCCTGCACTTGAAAACAGAAATACAAGAGTTTCCTCCTTGTGTCAAGAAAATATCTC CTCTTCATGAGATCTTTCTCAGAGGATGTAGAAAGTTGGTATCAATACCAACGATTTGGGATTCTATCTCCTACATGGAT GCAACAGACTGTGAATCCCTGGAGATACTTGAATGCTCATTTCGCAATCCATCGGTTTGGCTCAACTTTGCCAACTGCTT CAAACTGAATCAAGAAGCGAGAGACTTGGTCATCCAGACTAGTATAGATGCAGTCTTACCAGGTGGAAAAGTGCCTGCAT ACTTCACTCATCGAGCTACTGGTGCGGGTCCACTGACAATCAAGTTGAATGAAAGGCCTCTTCCTATATCCATGAGCTTT AAAGCTTGTATATTGCTGGTTAGTAACGGTGATCATGCCGCTTGCTGTATAGATGAATCGACGGATGTGACTGTTATGTA TAACAATGACAGTTATATGCTATATCCGCCTTTGGCAGAGCATCTGTACACATTCCAAGTGGAAGCGGAGGTTACTTCCA GCCAGCTTCTACTTCTCTCAGTTGGAGCCAAGACGAAGATAAACCTGTTGTCTATTGTAACCAATTGTTTCTCATATCAT ATGCCATTGAAAATTTAG |
| AA seq | Len:886 aa MDSSFFLTTVAAAVGLFTLLRKLRIHKDNVEKDSSSSSSSSSYSSSSVLPPSSPSRIWTHHVFPSFRGEDVRRDFLSHIQ MELQRKGITPFVDNEIKRGESIGPELIKAIRGSKIAIILLSRNYASSKWCLDELVEIMKCREEFGQTVMAIFYKVDPSDV KKLTGDFGKGFGRTCAGKTKEDIGRGREALAKVATIAGYHSSNWDNEAAMIEKIATDISNMLNNFTPSSDFEELVGMRAH LEKMEPLLCLDSDEVRMIGIWGPPGIGKTTIARVAYNQLSNSFQLSVFMDNIKAICSRPCSDDYSAKLQLQQQFMSQITN HKDMVVSHLGVASNRLKDKKVLVQEWTRSLPRLKASLGADIRSKIRKVEEHLTKKFLEVRQRLNVLAEKSLVSIDSGYIT MHSLLQKLGREIVCRQSIHEPGHRQFLYNKREICEVLIGDETGSKSVIGIQFDRNGIKEKLDISEKAFEGMSNLEFLKVY GYHDTMQLNRSLNYLSHKLRLLHWSHFPMTCLPCTVNLKFLVELIMDHSKLENLWEGKKSNLKWMDLSYSVNLKELPDLS TATNLEKLYLNDCSSLVKLPCTNGYTNNLEKLDLRNCSSLIELPWSFGNSTKLEKLYLEGCSKLEVIPTNINLESLDILN LRNCSMLKSFPQISTNIRHLDLTGTAIEDVPPSISLHLKTEIQEFPPCVKKISPLHEIFLRGCRKLVSIPTIWDSISYMD ATDCESLEILECSFRNPSVWLNFANCFKLNQEARDLVIQTSIDAVLPGGKVPAYFTHRATGAGPLTIKLNERPLPISMSF KACILLVSNGDHAACCIDESTDVTVMYNNDSYMLYPPLAEHLYTFQVEAEVTSSQLLLLSVGAKTKINLLSIVTNCFSYH MPLKI* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |