Names & Information
Knowledge of BnaC09G0535800ZS:
| Gene Name | BnaC09G0535800ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g44520D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:4530 nt ATGAGCAGCGGCGGGAGGAACTTCCCATCGAGAGGTCATCCATTTCGCCGGCCGCCGCGTTCCGCCACCAAACCGCAACG TCCGTCTTCGCTCTTGGCGCGGAAGCGGGAATTGAAGTTGAACGGAGGATCTCCTTCCTTTATCAGGTTTCCTCGTCGTA TCAAATGCTCCTCCTTCGATGCTTGTTCTTCTACAGCAGATGGCGCAGCTGGTTACCGTCGATTATCATCTCCCTCCGGT TCCCATTCCGAAGATATTGCTTGCGTTGTCGATGTTGATTATCGATCATCGGTTTCCTCCTCTTCTCCCGCCGCCGTTGC TGATTGTTCCGTCGCTGGTTACCGTCGATCATCAACTCCCTCCGGTTCCGAGCCGGGCGATGTTACATCTGTTGTTGATA ACCTCGATGCTAATTATCGATTATCCTCCCCCTCTTCTCCTGCCGCCGTTGCTGATTCTCAGTTGAAATACGATGTGTTT ATCAGTTTCCGAGGAAAAGATTCTCGTGACGGTTTCGTGAGCCACCTCTACGACGATCTGTGCCGAGAAGGCACTGAAAC TTTTATAGACAGTGAAAAGCTATATGCAGGCGAAGAGATCAAGACGGCGTTAACCGATGCGATTGAGCGATCGAGTATCT CGGTGGTGGTTTTTACCAAGGAATACGCCTCGTCCAAGTGGTGTTTGAGAGAGCTTGCAAAGATAATGGAGTGTAGGAGG AGCAGGGGCCAGCTAGTTTTGCCAGTCTTCCTCGGCGTAGAACCCATGGAAGTTAGGTGGCAGACGGGATGCTACGATGT GGCCTTTGCTAGGCATGATAAGGCTCCCGAGGGATCACCTTTAGCTGAGGAAGTAAAGCTGTGGAGGAAAGCCATGACTG AGGCAGCCGATCTCTCTGGATTTGATTCTACTGCTGTGAGGCCCGCTTCTAAACTTGTGGACAAAATTGTTGCACGCATT TTGGAGAACCTTGAAAGCAATTGCTTGCGTGAAGAGGAGGGCTTGGTTGGAGCTTATCCTCAGGTAAAAGAAGTGGAAGA GTTGTTGGAAAATGGATCAGATGAAGTGCAGACTATAGGAATACATGGACTTGGGGGTAGTGGAAAGACCGCCATTGCTG GTGCCGTTTTTAATCGTCAACATCAAAAGTTTGATAGCTATTGCTTCCTTGCAAATGTCAGAGAAGAATCTGAAAAGCAT GGGCTTCTTGGCTTAAGAAACGAACTACTACGTCAAATCCTTGGTCAGACTGATATAAACATTCCTACACCTGACATTGG ATCCAGCAATATAAGGAATCGTCTACGCCGGAAAAGAGTTCTTGTTGTTCTCGACGATGTTAGCAGCATAACTCAGCTGG ACTTTTTAATCAAACAAGCGACTTACTATGGTCCGGGAAGTAGAGTTCTTATTACAACAAGAGACATGAATGTAATCAAG AATGCTAGCAAAGTTTATTCGGTGAAAGGACTATCTGGCAGTGATTCGCTTGAACTGTTTTCACGTTGCGCCTTCAAACA GAGCTATCCTCCTGACGAATATTTGCAATTGTCGATGAGGGCAGCTGCTTATGCAAAGGGGCTCCCTTTGGCTTTAGAAG TTCTGGGTTCCTTTCTTTGTAAAAAAACTGTGCTAGAGTGGGAAAGCGCATTAAGAAGACTCGAAAGTTCTCCTGAGAAA GAAATCTCGAGAGTACTGCGTATAGGTTATGACGGACTCAATGATGAAGAGAAAACGATGTTTCTCGATATCGCTTGTTT CTTCAATGGGGAACAAAGAAGTCGCGTAACTGCTCATTGGGATGCTTGTGGTATATCTGTGGATATTGGGATACGCGCAC TTCTTGATAAGTGTATGATTACCTTATCTGATGATAGGCTGCATATGCATGAACTGTTTCAAGAAATGGGTAGAGAAATT GTACGGCAGGAGTCACCTCTGGATCCCGGTAAACGCAGCAGGCTGTGGAGCTCTGAGGATGGCCACGAAGTCTTAACAGA AAATACGGGAACTATATCAACTGAAGGCATATGCCTGGACATTTCTGAAATAGAAGAGATGCAGATCGGCCGTCATGCTT TTGCAGGGATGCCTAATCTGAGGTCTCTGAAAATCAATTCTCACAGTCGGTTTAATGAAGAAAATTGCAAAATCTATCTT CCGGAAGGCCTTGAAGATTTCCCTCATAAACTGCGTCTACTTCAATGGGAGTACTATCCTTTAGAAAATCTTCCATCAAG CTTTAAACCAAATCACCTGGTTGAACTTATAATGCCCAAAAGCAAACTTGAGCGTTTGTGGGAAGGGGTACAGCATCTAC CTTGTTTAAAAGTGATTGATGTCAGCAACTCCCCGTTCCTGAAGGAGTTTCCAGACGTGTCAAATGCTCCCAGGCTTGAA CTTATTGTTGCCAGAGGATGTGGAGATTTAGTGACCATTCCAACTCCAAAAAAGAAGTTGAAATCTCTTGAGCACTTGGA TCTTTGTGGATGCTCAAAGATAACAGTTTTTCCAGAGATTTCATGGAATATCAAAACGTTGTCACTGGCTGATACTGGAA TAGAGGAAATTCCACCATCAATTGAAAACTTCCATCAGCTTGTTTACTTAGATATGAGAGGGTGCAAGATGCTCAAGAAT GTTGCACAAATCGGTCACAAATTGGAGAAGCTAGAATTTTTGGATCTATCAGGTTGTTCTAGTGTTACAAGCTTTCCAGA TATTTCTAACAATGTGGAAGTACTTATTCTCAATGGGACTGCCATAGAAGAGATCCCTTCCCATATCAAGTACATGAGAA GACTAGAGTTACTGGAGATAAAGAATTGTCCGAGGTTGAAGGGTCTTCCGATCAGTATATGGGAGTTACCGTCTCTTGTG GAACTTAATATTTCTGGATGTCCAAACTTCACAAGCTTTACTGAAATCACAGAGATAATGGCCAGTCTAGAGTATCTTTC TTTGAACGGAACGGCCATTACGGAGTTACATTCTTCAATTGAGAACTTGACTGGCCTTTCGTCTCTAGATCTTGAGAATT GCAGCAACCTCCTCAGTCTTCCGGACAAATTATCCAAATTAAAGTTCCTGAAGGACCTTAATATCTCTGGCTGCTCAAAT TTGGATAACTTGCCAAGAAGCATTGGAAATCATGGATCTTTGGTTAATGTCAGAGCAAGAGGATGCAAAAGAGAAATTGC TAATTGTTTCGGGCCTGGCTTAATCTCACTGAAAACTCTAGATTTAAGCGACTGTGGAATCACGGAGTTTCCCGAGGCTC TAACACTTATTTCTACCCTGACGGAGCTAGATCTAAGCCAGAATTGTTTCAGCGCAATACCTCCAAGCATCAAGGATCTT CAAGAGCTCCAAAGTCTCGATTTAAGCCATTGCCAGGAGCTTCAATCTCTATCAGGGGTCCCAGCTGGTCTGACAAGGCT TAATGTTCTAAACTGCAGATCGCTGGAAATGGTTGTACTCGGTAACTCTTCTGAGCTTCAGCTTTATCCTTTAAGCAATG TGGAAACCTTTGTGTTTGCTGATTGCCCATCACTAAGCCATTATGCGATAGAAAATATCCAGGCATTTGCAAGACGCAGA ATCTATGTTCTGGCATCCCATTTGGGTGTTACCTTAAACTTTAGAGGTGGCGACCTTTCTCTCAACAGTTGGATGAAACC ACAACAACTGCGGTATTTACTCTCTAGCTTGTACGGATATGGAAGCCTCCACGAAGCACTGATAGGATTACATGCAGCTT TTTTCAGTAATGAACTGATATCAAAGGAGCATCCATCTAGGCTACTTAGTCGCATACTCCATGATTTTCATGAACGGTAT AGGCTAAGTATTCAGGATATGCTGCACTTCTTCTCCTTGATCGCGCATCTATATTTGTATTACCAAGGAAAGCCTTCAAC CAATTTCTGCTTTCCAAGTGCTGACATTCCTGAATGGTTTTGCCACCAAAGAAATGGGTCATTTATTGCGGTTATGGTTC AGCGTCCCGAACGTTCAGATGAGATTTCTACTTTGGCAGGTTTTGCTATATCTGTTCTCGTTGCATTTGACGGCTACAAT GATGACAAGGGTATCAGCATCAAATATGAATGTCATTTCTATTCTAAATCTTCTGGCACTCGTGAGGGAGAAGGGTATTT GAGGGGATGGGATGGGAAAAAGGGGACGCCTTCGGCTATTGAAGGGGATCATTTGTTCTTGGGTTTTGATTCATCTATTC TATTTGGTGCGGCCAATGGAATCGAACAGTTTGTTGGATATTCTGAAGATCTTGTCAAAGCCACTTTTCAATGTTACATC GTTGATGAGGATGGGAATACTATCAATTCTTGCACGGTGAAGAAGTGTGCAATCCAACCACTCTATACCAGTGATATGAC AAGGTCTCAGACGAAAATCTTAAGCAGACAGGACATAACCAAAGGATTGACCACCAGGTTTGCAGGGTTTCTTGACAAGG TTTGTGAACTGTTCATACATTTGATAGTAATACACGCCTTCGGTTATTGA |
| AA seq | Len:1510 aa MSSGGRNFPSRGHPFRRPPRSATKPQRPSSLLARKRELKLNGGSPSFIRFPRRIKCSSFDACSSTADGAAGYRRLSSPSG SHSEDIACVVDVDYRSSVSSSSPAAVADCSVAGYRRSSTPSGSEPGDVTSVVDNLDANYRLSSPSSPAAVADSQLKYDVF ISFRGKDSRDGFVSHLYDDLCREGTETFIDSEKLYAGEEIKTALTDAIERSSISVVVFTKEYASSKWCLRELAKIMECRR SRGQLVLPVFLGVEPMEVRWQTGCYDVAFARHDKAPEGSPLAEEVKLWRKAMTEAADLSGFDSTAVRPASKLVDKIVARI LENLESNCLREEEGLVGAYPQVKEVEELLENGSDEVQTIGIHGLGGSGKTAIAGAVFNRQHQKFDSYCFLANVREESEKH GLLGLRNELLRQILGQTDINIPTPDIGSSNIRNRLRRKRVLVVLDDVSSITQLDFLIKQATYYGPGSRVLITTRDMNVIK NASKVYSVKGLSGSDSLELFSRCAFKQSYPPDEYLQLSMRAAAYAKGLPLALEVLGSFLCKKTVLEWESALRRLESSPEK EISRVLRIGYDGLNDEEKTMFLDIACFFNGEQRSRVTAHWDACGISVDIGIRALLDKCMITLSDDRLHMHELFQEMGREI VRQESPLDPGKRSRLWSSEDGHEVLTENTGTISTEGICLDISEIEEMQIGRHAFAGMPNLRSLKINSHSRFNEENCKIYL PEGLEDFPHKLRLLQWEYYPLENLPSSFKPNHLVELIMPKSKLERLWEGVQHLPCLKVIDVSNSPFLKEFPDVSNAPRLE LIVARGCGDLVTIPTPKKKLKSLEHLDLCGCSKITVFPEISWNIKTLSLADTGIEEIPPSIENFHQLVYLDMRGCKMLKN VAQIGHKLEKLEFLDLSGCSSVTSFPDISNNVEVLILNGTAIEEIPSHIKYMRRLELLEIKNCPRLKGLPISIWELPSLV ELNISGCPNFTSFTEITEIMASLEYLSLNGTAITELHSSIENLTGLSSLDLENCSNLLSLPDKLSKLKFLKDLNISGCSN LDNLPRSIGNHGSLVNVRARGCKREIANCFGPGLISLKTLDLSDCGITEFPEALTLISTLTELDLSQNCFSAIPPSIKDL QELQSLDLSHCQELQSLSGVPAGLTRLNVLNCRSLEMVVLGNSSELQLYPLSNVETFVFADCPSLSHYAIENIQAFARRR IYVLASHLGVTLNFRGGDLSLNSWMKPQQLRYLLSSLYGYGSLHEALIGLHAAFFSNELISKEHPSRLLSRILHDFHERY RLSIQDMLHFFSLIAHLYLYYQGKPSTNFCFPSADIPEWFCHQRNGSFIAVMVQRPERSDEISTLAGFAISVLVAFDGYN DDKGISIKYECHFYSKSSGTREGEGYLRGWDGKKGTPSAIEGDHLFLGFDSSILFGAANGIEQFVGYSEDLVKATFQCYI VDEDGNTINSCTVKKCAIQPLYTSDMTRSQTKILSRQDITKGLTTRFAGFLDKVCELFIHLIVIHAFGY* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |