Names & Information
Knowledge of BnaC09G0545400ZY:
| Gene Name | BnaC09G0545400ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g50760D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein At5g04720 OS=Arabidopsis thaliana GN=At5g04720 PE=2 SV=1 |
| NT seq | Len:2565 nt ATGAGTGGGTCCCACGTCTCCCGTCTACTTCTTTACTTCACTCCGCCGTGGGGAACTTTTCTTCTTCAGTTCTTCTTTCA CCACACACCAACTATCCCCTCTCTCTCTCTTTCTCTCATCATGGCCGAACTTATCGGTGGAGAAGTTGTGACGGAGCTCG TAAAACAGCTCTTCGCCGTATCCAAAAAAGCCTTGAGATGCAGAGGCGTCGCGGAGAATCTCGCCACCATGATCGCAGGC GTTCAACCGACCATCAAGGAGATCGTCTACAGCGGAGTAGAAGTGAGCGCCCATCGCCAGGTTCAGCTCCGCATGTTCTC TGAAACCTTAGACAAGTGCAAGAAGCTCACCGACAAGGTTCTCAAATGCAACCGCTGGAACATGGTTCGTCAGCTTTACC ACGCCAAGAAAATGGAAGACTTGGAGAAGAAGATCTCGCGGTTTATCCAGGGCTTGCCTCTCCATGTTCTCTGTGACGTT CATCACCTTCGCGCTGATTCTGAGGTTCGCTTCGACCGGATCGACAGGGGTTTCGATAGCTTGAGTGAGAAGATGGGGTC TATGAAGATCAGGGGAGGTGGTTTGGTGCAGGAGGAGATGAAGGCTGGTGAAGCTGCGATGGAGATGTTGACAGAAGGTG ATTTGGGGAACTTGGGGGTGGGGTTGGAGTTGGGAAAGAGGAAGGTGAAGGAGATGATGTTTGGTTTGAAAGATGAAGGA GGACTTGTCGGGATCTCGGGGATGAGCGGTTCAGGGAAGACCACTCTTGCTAAAGAGCTTGCAAGGGACGAAGAGGTCCT AGGCCACTTCGGGAGACGAGTTTTGTTTCTGACTGTCTCACAGTCCCCCAATATTGAGGAACTGAAAGCCATTATATGGG GATTTCTTACTGGTAATGAAGATGGCTTTGGTGCCACTCTTCCTGAACCAGTCGGTCAGACACAGAGGCTGGTGATCCTT GATGATGTTTGGACAAGGGAAGCACTGGACAAGCTGATGTTTAAGATTCCTGGAACCACAACTCTTGTGGTCTCACGGTC TAAGCTAGCAGATCCTAGAACAACCTATGAAGTAGAGTTACTAAATGAAAATGAAGCAACGTCTCTGTTCTGTCTCTCTG CGTTCAACGAGAAATCAGTACCTTTTGGATACAGCAAAGAGCTGGTCAAGCAGGTTGTTGCGGAGTGTAAAGGTCTACCT TTGTCTCTGAAAGTCGTTGGTGCTTCTTTAAAAGGCCGACCTGAAAAATATTGGGAAGGTGTAGTGAAAAGGCTATCAAA AGGTGAACCCGCTGATGAAACTCATGAGAGTAGAGTGTTTGCTCAAATAGAAGCAACTCTAGAGACTCTAGACCCAAAAA CCAGAGAGTGTTTCATGGATATGGGTGCTTTCCCTGAAGACAAGAAGATCCCTCTTGATGTTATCATCAACATGTGGGTT GAGATGTATGATCTTGAGGATGCAACTGCCTTTGCTGTTCTTGTTGATCTATCAAACAGGAATCTCCTTACTCTTGTCAA AGATCCAAGGTTTGGCGCTATGTACACTAGCTACTATGATATTTTTGTGACGCAACACGATGTTCTAAGGGACCTGGCAC TTCATCTTAGCAACCGTGGGAGAGTTAACAAAAGAGAGAGGCTATTGATGCCAAGGAGAGAGTCAGTGCTTCCAAAAGAA TGGGAGAGGAGAAATGATGAGGCATACAATGCACGTATAGTTTCCATCCACACAGAGGAGATGACTGAGATGGAGTGGTT TGACATGGAACTCCCTAAGGCAGAAGTTCTGATACTAAACTTCTCTGCAGAGAGCTATGTACTGCCACCTTTCATTGCTA AGATGGGAAGGCTTAGAGCGCTGGTGATTATCAACAACGGTATGTCTCCTGCGCATCTTCATGACTTCTCCACATTTACC AATCTGGCCAAACTCAAGAGTCTCTGGCTTGAGAGGGTTCATGTCCCTGAACTCTCTACAAGTACCGTTCCTTTAAAAAG CCTCCGCAAGATGTCTCTGATCCTTTGCAAGATCAATAACAGTTTTGATCAAACATCAGTAGACATGTCCCAGATCTTCC CAAACTTGTCTGATCTCACAATAGATCACTGTGATGATCTCGTGGAACTACCAACGACCGTCTGTGGAATCACCTCTCTC AACTCCATCAGCATAACAAACTGTCCCCGCATCAGCGAGTTACCTAAGAATCTGAGCAAGCTAAAGGCACTTCAGCTTCT GAGGCTATACGCTTGTCTGGAGCTGAAAGCTCTCCCTGTGGAGATCTGTGAGCTGCCGAGACTAAAGTACCTAGACATCT CTCAGTGTGTCAACCTGAGTTTTCTTCCGGAAGAGATAGGAAAGGTGAGGACGCTTGAGAAAATCGACATGAGAGAATGC AGCTTAACGAGCATACCTAGCTCTGCGGCTTCATTGACTTCTCTACGCCATGTGATATGCGATGTAGAGACTTTGTGGAT GTGGGAACATGTCGAGAAGGTGGTTCCGGGACTTCGTGTTGAAGGCGCTGAAAAATGCTTCAGCCTTGATTGGCTCAACG AGTAG |
| AA seq | Len:855 aa MSGSHVSRLLLYFTPPWGTFLLQFFFHHTPTIPSLSLSLIMAELIGGEVVTELVKQLFAVSKKALRCRGVAENLATMIAG VQPTIKEIVYSGVEVSAHRQVQLRMFSETLDKCKKLTDKVLKCNRWNMVRQLYHAKKMEDLEKKISRFIQGLPLHVLCDV HHLRADSEVRFDRIDRGFDSLSEKMGSMKIRGGGLVQEEMKAGEAAMEMLTEGDLGNLGVGLELGKRKVKEMMFGLKDEG GLVGISGMSGSGKTTLAKELARDEEVLGHFGRRVLFLTVSQSPNIEELKAIIWGFLTGNEDGFGATLPEPVGQTQRLVIL DDVWTREALDKLMFKIPGTTTLVVSRSKLADPRTTYEVELLNENEATSLFCLSAFNEKSVPFGYSKELVKQVVAECKGLP LSLKVVGASLKGRPEKYWEGVVKRLSKGEPADETHESRVFAQIEATLETLDPKTRECFMDMGAFPEDKKIPLDVIINMWV EMYDLEDATAFAVLVDLSNRNLLTLVKDPRFGAMYTSYYDIFVTQHDVLRDLALHLSNRGRVNKRERLLMPRRESVLPKE WERRNDEAYNARIVSIHTEEMTEMEWFDMELPKAEVLILNFSAESYVLPPFIAKMGRLRALVIINNGMSPAHLHDFSTFT NLAKLKSLWLERVHVPELSTSTVPLKSLRKMSLILCKINNSFDQTSVDMSQIFPNLSDLTIDHCDDLVELPTTVCGITSL NSISITNCPRISELPKNLSKLKALQLLRLYACLELKALPVEICELPRLKYLDISQCVNLSFLPEEIGKVRTLEKIDMREC SLTSIPSSAASLTSLRHVICDVETLWMWEHVEKVVPGLRVEGAEKCFSLDWLNE* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | probable disease resistance protein At4g27220; K13459 disease resistance protein RPS2 (A) |