Names & Information
Knowledge of BnaC09G0570300WE:
| Gene Name | BnaC09G0570300WE |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable disease resistance protein At5g04720 [Brassica rapa] |
| Best Hit (SwissProt) | Probable disease resistance protein At5g04720 OS=Arabidopsis thaliana GN=At5g04720 PE=2 SV=1 |
| NT seq | Len:2445 nt ATGGCCGAACTTATCGGTGGAGAAGTTGTGACGGAGCTCGTAAAACAGCTCTTCGCCGTATCCAAAAAAGCCTTGAGATG CAGAGGCGTCGCGGAGAATCTCGCCACCATGATCGCAGGCGTTCAACCGACCATCAAGGAGATCGTCTACAGCGGAGTAG AAGTGAGCGCCCATCGCCAGGTTCAGCTCCGCATGTTCTCTGAAACCTTAGACAAGTGCAAGAAGCTCACCGACAAGGTT CTCAAATGCAACCGCTGGAACATGGTTCGTCAGCTTTACCACGCCAAGAAAATGGAAGACTTGGAGAAGAAGATCTCGCG GTTTATCCAGGGCTTGCCTCTCCATGTTCTCTGTGACGTTCATCACCTTCGCGCTGATTCTGAGGTTCGCTTCGACCGGA TCGACAGGGGTTTCGATAGCTTGAGTGAGAAGATGGGGTCTATGAAGATCAGGGGAGGTGGTTTGGTGCAGGAGGAGATG AAGGCTGGTGAAGCTGCGATGGAGATGTTGACAGAAGGTGATTTGGGGAACTTGGGGGTGGGGTTGGAGTTGGGAAAGAG GAAGGTGAAGGAGATGATGTTTGGTTTGAAAGATGAAGGAGGACTTGTCGGGATCTCGGGGATGAGCGGTTCAGGGAAGA CCACTCTTGCTAAAGAGCTTGCAAGGGACGAAGAGGTCCTAGGCCACTTCGGGAGACGAGTTTTGTTTCTGACTGTCTCA CAGTCCCCCAATATTGAGGAACTGAAAGCCATTATATGGGGATTTCTTACTGGTAATGAAGATGGCTTTGGTGCCACTCT TCCTGAACCAGTCGGTCAGACACAGAGGCTGGTGATCCTTGATGATGTTTGGACAAGGGAAGCACTGGACAAGCTGATGT TTAAGATTCCTGGAACCACAACTCTTGTGGTCTCACGGTCTAAGCTAGCAGATCCTAGAACAACCTATGAAGTAGAGTTA CTAAATGAAAATGAAGCAACGTCTCTGTTCTGTCTCTCTGCGTTCAACGAGAAATCAGTACCTTTTGGATACAGCAAAGA GCTGGTCAAGCAGGTTGTTGCGGAGTGTAAAGGTCTACCTTTGTCTCTGAAAGTCGTTGGTGCTTCTTTAAAAGGCCGAC CTGAAAAATATTGGGAAGGTGTAGTGAAAAGGCTATCAAAAGGTGAACCCGCTGATGAAACTCATGAGAGTAGAGTGTTT GCTCAAATAGAAGCAACTCTAGAGACTCTAGACCCAAAAACCAGAGAGTGTTTCATGGATATGGGTGCTTTCCCTGAAGA CAAGAAGATCCCTCTTGATGTTATCATCAACATGTGGGTTGAGATGTATGATCTTGAGGATGCAACTGCCTTTGCTGTTC TTGTTGATCTATCAAACAGGAATCTCCTTACTCTTGTCAAAGATCCAAGGTTTGGCGCTATGTACACTAGCTACTATGAT ATTTTTGTGACGCAACACGATGTTCTAAGGGACCTGGCACTTCATCTTAGCAACCGTGGGAGAGTTAACAAAAGAGAGAG GCTATTGATGCCAAGGAGAGAGTCAGTGCTTCCAAAAGAATGGGAGAGGAGAAATGATGAGGCATACAATGCACGTATAG TTTCCATCCACACAGAGGAGATGACTGAGATGGAGTGGTTTGACATGGAACTCCCTAAGGCAGAAGTTCTGATACTAAAC TTCTCTGCAGAGAGCTATGTACTGCCACCTTTCATTGCTAAGATGGGAAGGCTTAGAGCGCTGGTGATTATCAACAACGG TATGTCTCCTGCGCATCTTCATGACTTCTCCACATTTACCAATCTGGCCAAACTCAAGAGTCTCTGGCTTGAGAGGGTTC ATGTCCCTGAACTCTCTACAAGTACTGTTCCTTTAAAAAGCCTCCGCAAGATGTCTCTGATCCTGTGCAAGATCAATAAC AGTTTTGATCAGACATCAGTAGACATGTCCCAGATCTTCCCAAACTTGTCTGATCTCACAATAGATCACTGTGATGATCT CGTGGAACTACCAGCGACCGTCTGTGGAATCACCTCTCTCAACTCCATCAGCATAACAAACTGTCCACGCATCAGCGAGT TGCCTAAGAATCTGAGCAAGCTAAAGGCACTTCAGCTTCTGAGGCTATACGCTTGTCTGGAGCTGAAAGCTCTACCTGTG GAGATCTGTGAGCTGCCGAGACTAAAGTACCTAGACATCTCTCAATGTGTCAACCTGAGTTTTCTTCCGGAAGAGATAGG AAAGGTGAGGACGCTTGAGAAAATCGACATGAGAGAATGCAGCTTAAGGAGCATACCTAGCTCTGCGGCTTCATTGACTT CTCTACGCCATGTGATATGCGATGTAGAGACTTTGTGGATGTGGGAACATGTCGAGAAGGTGGTTCCGGGACTTCGTGTT GAAGGCGCTGAAAAATGCTTCAGCCTTGATTGGCTCAACGAGTAG |
| AA seq | Len:815 aa MAELIGGEVVTELVKQLFAVSKKALRCRGVAENLATMIAGVQPTIKEIVYSGVEVSAHRQVQLRMFSETLDKCKKLTDKV LKCNRWNMVRQLYHAKKMEDLEKKISRFIQGLPLHVLCDVHHLRADSEVRFDRIDRGFDSLSEKMGSMKIRGGGLVQEEM KAGEAAMEMLTEGDLGNLGVGLELGKRKVKEMMFGLKDEGGLVGISGMSGSGKTTLAKELARDEEVLGHFGRRVLFLTVS QSPNIEELKAIIWGFLTGNEDGFGATLPEPVGQTQRLVILDDVWTREALDKLMFKIPGTTTLVVSRSKLADPRTTYEVEL LNENEATSLFCLSAFNEKSVPFGYSKELVKQVVAECKGLPLSLKVVGASLKGRPEKYWEGVVKRLSKGEPADETHESRVF AQIEATLETLDPKTRECFMDMGAFPEDKKIPLDVIINMWVEMYDLEDATAFAVLVDLSNRNLLTLVKDPRFGAMYTSYYD IFVTQHDVLRDLALHLSNRGRVNKRERLLMPRRESVLPKEWERRNDEAYNARIVSIHTEEMTEMEWFDMELPKAEVLILN FSAESYVLPPFIAKMGRLRALVIINNGMSPAHLHDFSTFTNLAKLKSLWLERVHVPELSTSTVPLKSLRKMSLILCKINN SFDQTSVDMSQIFPNLSDLTIDHCDDLVELPATVCGITSLNSISITNCPRISELPKNLSKLKALQLLRLYACLELKALPV EICELPRLKYLDISQCVNLSFLPEEIGKVRTLEKIDMRECSLRSIPSSAASLTSLRHVICDVETLWMWEHVEKVVPGLRV EGAEKCFSLDWLNE* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | probable disease resistance protein At4g27220; K13459 disease resistance protein RPS2 (A) |