Names & Information
Knowledge of Bnascaffold0025G0033000ZS:
| Gene Name | Bnascaffold0025G0033000ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA01g32130D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS6 OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1 |
| NT seq | Len:2007 nt ATGGGGAAAAATCAGAGAAACTCTCATGAAATTACACTGTTACTCGCAAGTGGTAAAGAGACAAACAATCATGACGAAGC CTGTGAGCTCCAGTTCTTCGCTGATGGTTCTCGTCCCAGTATCTCAGTACTGATTCTCTCCCATTCATGGCCACTTCTTC TCTTGCAATTGGGTATTCGACGTCTTCCCGAGCTTCAGCGGAGAAGATACAACGAGATAGAGAGAAGCCAGTCCATCGGC CTGAAGCTAGTACACGCGATCAGAGATTCGAGGATCGCTATCGTTGTCTTCTCCAAGACATACGCCTCTTCCACCTGGTG CTTGAACGAGTTGCTGGAGATCATCAAATGCAAGGAAGAGAAAGGGCAAATGGTGATTATTCCAGTGTTCTATGGTTTGG ATCCATCTCATGTCAGGAAACAGACAGGCGAGTTCGGAGAGACGTTTCAGATGATTTGCAAGAACAGATCAGATGAGTTG CCTGATCTATGGAAAGGAGCTTTGACACATGTAGCAAATATCCATGGATATCACTCTGACAACTGGAGTAACGAAGCACA TCTGATTGAAGACATCACCAATGATGTTTTGGGTAGACTTGTTAGTTTAACACCGTCAATGGGGTTTGCTGACTTTGCTG GAATAGAAGATCATATAGCTAAGATGAGTGTATTGTTGCAGTTGGAATCAGAGGAAGTGAGGATGATTGGGATATGGGGT CCCGTTGGGATTGGGAAGACTACCATTGCAAGAGCTCTGTTTGGTCGAATCTCTCGTCACTTCCAAAGTAGCATTTTCAT AGACAGGGCTTTCGTATCAAAGACTATGGAAATCTTCAGGACAGCCAATCCAGACGACTACAACATGAAGTTGCGCTTGC AAGAATGTTTCCTGTCTGAGATTTTAAACAAAAAGGATATAAAGATACATCACTTAGGCGTGGTCGGAGAGAGGCTAAAG CACAAGAGAGTTCTTGTAGTACTTGATGATTTGAGTGATCAACTAGTGCTAGATTCCTTGGTTGGTGGAACTCAATGGTT TGGATGTGGGAGCAGAGTTCTCGTCGTTACAAAACACAAGCATGTACTGAGAGCTCATGGGATTGATCTTATTTACGAGG TTGGTCTCCCATCTGATGAGCTAGCTCTAGATATGTTTTGCACATATGCATTCAGGGAGAACTCCCAACGCGATGGATTT AACGAGCTTGCTTCTGAAGTGGCCAAATTCGCGGGTAATCTTCCTTTGGCTCTTAACGTTTTGGGGTTGTACTTGCGAGG GAGGGACAAAGAGGATTGGTTAGATATGTTGCCTAGGCTTCGGAAAGGACTAGATGGGAAAATCAAGAAAGCACTCAGAG TTAGCTATGATGGGTTAGGCTGCAAAGAAGATAAATCACTGTTTCGTCACGTTGCATGTCTTTTTAATGGTATGGAAGCC AATGACATCAAGATGTTACTTGCTGATAGTGGCTTGGATGTTAATATCGGGCTTAAAAACTTAATCGATAACTCGCTTAT ACATGAGAGAGGGAGCTGTGTGCATATACATTGTTTGGTACAAAGAATGGGTAAAGAAATCGTCCGTACACAGTCCAACA AGCCTAGAGAACGAGAGTTCCTGATGGATTCTAAGGATGTTTGTGATCTATTTAATGGTAACTCTGATAGTAAAAAGGTT ATGGGTATATCATTGAATCTAGCAGAGTTGTATGAACTGTTACGCATCGATAAGAAGGCCTTCAGAAGATTACGTAATCT CCGTTTCTTGAGAATATACAGGGACTCACTGGACTTGCATAAACAACTTTGTGCTGAGCACCTTGTTGTGCTCAGAATGC GAAACAGCAAGCTCGAGAAACTGTGGAAAGAAGATGAGTCACCTACATGCCTGGAGGTTATGGTGGCAGTTCCTCAGCCT ATTTGGATGCTCAATGAAGTATATATGCAAGTTTGCACAGAGCTGGAGGCTCTTGTTCATACTGGCATCAACCTGGAATC TTTATAG |
| AA seq | Len:669 aa MGKNQRNSHEITLLLASGKETNNHDEACELQFFADGSRPSISVLILSHSWPLLLLQLGIRRLPELQRRRYNEIERSQSIG LKLVHAIRDSRIAIVVFSKTYASSTWCLNELLEIIKCKEEKGQMVIIPVFYGLDPSHVRKQTGEFGETFQMICKNRSDEL PDLWKGALTHVANIHGYHSDNWSNEAHLIEDITNDVLGRLVSLTPSMGFADFAGIEDHIAKMSVLLQLESEEVRMIGIWG PVGIGKTTIARALFGRISRHFQSSIFIDRAFVSKTMEIFRTANPDDYNMKLRLQECFLSEILNKKDIKIHHLGVVGERLK HKRVLVVLDDLSDQLVLDSLVGGTQWFGCGSRVLVVTKHKHVLRAHGIDLIYEVGLPSDELALDMFCTYAFRENSQRDGF NELASEVAKFAGNLPLALNVLGLYLRGRDKEDWLDMLPRLRKGLDGKIKKALRVSYDGLGCKEDKSLFRHVACLFNGMEA NDIKMLLADSGLDVNIGLKNLIDNSLIHERGSCVHIHCLVQRMGKEIVRTQSNKPREREFLMDSKDVCDLFNGNSDSKKV MGISLNLAELYELLRIDKKAFRRLRNLRFLRIYRDSLDLHKQLCAEHLVVLRMRNSKLEKLWKEDESPTCLEVMVAVPQP IWMLNEVYMQVCTELEALVHTGINLESL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |