Names & Information
Knowledge of Bnascaffold1123G0000200GG:
| Gene Name | Bnascaffold1123G0000200GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | disease resistance protein [Brassica rapa subsp. pekinensis] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:1491 nt ATGGCTTCTCTATCTCGCACTTTGAAACATGATGTCTTCCCGAGCTTCTGTGGAGGAGACGTGCGCAAAACCTTTCTTAG TCACCTTCTGAAAGAGCTCAAAAGCAAGGGAATCCAAGCTTTCATAGATGACGAGATTGAACGAGGCCAACGTATCGGTC CCGAGCTCGTACTAGCGATCAGAGAGTCAAGGGTTGCCATTGTCTTGCTCTCCGTTAACTACGCTTCTTCAAGCTGGTGT TTGGATGAGTTAGTGGAGATCATGAAAGGCAAGGCAAAGGATCAAGATGAGTTGGAGGAAATCATGGAGAGGGATCAACA AAAAGTGATATCCATTTTCTACGAAGTGGATCCATCTGATGTTAGGAAGCAGACCGGAGATTTCGGGAAAGCCTTTGAAA AAACCTGTGTGGGGAAAGAAGTAAAGGTCAAGGCATGGAGGGAAGCTTTGGAGGGTGTCGCCAATATAGCTGGTTATGAT TCTCGGAGATGGGAAAACGAAGCTGATTTGATCAACAAAATTGCCGTTGAGCTTATGAGTGTATTGGGTTTTACACCGTC AAAAGACTTTGATGACTTTGTCGGCATAGGAGCTCAAATCACGGAGATAAAATCAAAGTTGATCCTACAATCAGAACAAG TTAAGATGACTGTCCTTGTGGGTCCTGCCGGGATTGGTAAGACAACCACAGCAACAGTTTTATACAACCAACTCTCTCCT GGTTTTCCATTCAGCACTTTTTTGGAGAATATCAGAGGAAGTTATGAGAAGCCTTGTGGTAACGACTATCAGTTGAAGTT GCGTTTGCAGAAAAAAATGTTGTCTCAAATATTCAACCAAAGTGATATTGAGGTTGGTCACTTACGAGTGGCTCAAGAAA AGCTGAGTGACAAAAAAGTGTTGGTTGTTCTTGATGAAGTGGATAGCTGGTGGCAACTCGAGGCAACTGCATACCAGCGC GGATGGTTTGGTCCCGGGAGTATTATTATCATTACAACCGAAGATAGAAAACTTCTCAAGACACTCAGATTGGGAATCGA TCATACCTACGAGATGAAATTTCCAACTAGAGATGAATCTCTTCAGATCTTGTGCCAATATGCTTTCGGTCAAAACTCAC CATACGATGGTTTTGAAGAGCTTGCTTGGGAAGTTACTTGGCTTGCTGGTGATCTTCCTCTAGCCCTGAGAGTCATGGGA TCTTATCTACGAGGTATGTCCAGGGACGAGTGGATAGAGGCACTACCAAGGCTCAGGTCTAGCCTTGATAGAGAAATTGA ATCGACTCTAAGATTTAGCTACGACGGGTTAAGTGATAAAGATCAAGCTCTTTTTCTACATATTGCATGTTTCTTTTCTT GTTCCCTCTGGAAGGTTGATAGTGTTAAGAGGTGTCTTGCAAACTGTGGTCTGGACGTCAACCATGGACTTCAAGTCTTA GCTGATAAATCTCTTATATATAGTTTACAAGGGATGCGTAGAGATGCATAG |
| AA seq | Len:497 aa MASLSRTLKHDVFPSFCGGDVRKTFLSHLLKELKSKGIQAFIDDEIERGQRIGPELVLAIRESRVAIVLLSVNYASSSWC LDELVEIMKGKAKDQDELEEIMERDQQKVISIFYEVDPSDVRKQTGDFGKAFEKTCVGKEVKVKAWREALEGVANIAGYD SRRWENEADLINKIAVELMSVLGFTPSKDFDDFVGIGAQITEIKSKLILQSEQVKMTVLVGPAGIGKTTTATVLYNQLSP GFPFSTFLENIRGSYEKPCGNDYQLKLRLQKKMLSQIFNQSDIEVGHLRVAQEKLSDKKVLVVLDEVDSWWQLEATAYQR GWFGPGSIIIITTEDRKLLKTLRLGIDHTYEMKFPTRDESLQILCQYAFGQNSPYDGFEELAWEVTWLAGDLPLALRVMG SYLRGMSRDEWIEALPRLRSSLDREIESTLRFSYDGLSDKDQALFLHIACFFSCSLWKVDSVKRCLANCGLDVNHGLQVL ADKSLIYSLQGMRRDA* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | NB-ARC domain |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |