Names & Information
Knowledge of Bnascaffold1150G0000100WE:
| Gene Name | Bnascaffold1150G0000100WE |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | hypothetical protein CARUB_v10025792mg [Capsella rubella] |
| Best Hit (SwissProt) | Disease resistance protein LAZ5 OS=Arabidopsis thaliana GN=LAZ5 PE=1 SV=1 |
| NT seq | Len:1281 nt ATGAATCACCGCATAAAGCAACTGCAAGAAATGATAGATTTTAATTGCGACCAAACTCAAATTGTTGGAATTGTCGGGAT GCCTGGGATTGGTAAAACCACTCTAGCTGAAGAATATTTTGAAAGGTCAAATGATAGGTATTCGTTTAACAAGATTATCT CGGACATTCGTGAGAGAGGGCATCATCATCTGGAGTGCAAGCTTCTGGAAGGTCAAAAGTTAAATGACGAGGCTATCATT TTCTCAAAGAAAAGTTTTCTTGTTTTGGATGATGTGAGCCAGAAGAAGCACATAGAGTTTTTACTCCAAAACAGAAGACG GATTAAGAAGGGAAGCAAGATTGTCATTACAACGCGTGACAAGTCATCGATAGCAGAATTCTCTCCCGAAATTTATGTTG TCCCTCCCTTGAACGATACAGTTGCCTGGCAGCTCTTTAATGATCATGCCTTTAAAGGTGGAGCCTCTAGCACCAAGGGA AACTTCCCCAAGCTGACCCAAAAGTTTGTGGATTATGCTGGAGGCAATCCACGAGCCCTCGAGGAACTTGGAAAGGAGCT TAATGGGAAAGACGAGGCTGAATGGGTGACGAGACTAGAGAACCTGCCATACCAGTGCAATAGTATTATCAAAAAAGAGT TGAAAATCAGTTATGAAGAACTCACTGAGCAGCAGAAGGATGCGTTTCTCGACATAGCTTGTTTCTTCAGATCAGAGGAA GAAAATTATGTAAAGTGTTTATTGGATTCTGAATGTGGTGATGTTGTTAAAAAGCTTGCTGAAATTTTTTTCATTTGTAT CTCTGGGGGAAAAATAGAGATGCACAATCTACTCTGTGCATTTGGCAAAGAGCTTAGGTCGGGGGAAAGAATGTGTGATC ATAGGAAAACTACTACAATTCTAAGAGATGCCGTTCAGCAGGAAACAAAAGATGTGAGAGGTATTTTTCTAGACACATGC ACAGAAACAAAAGGGATATCAGTAGACAGTAAAAGATTTACCGAAAAGTTCAACCCGATGAATCTGCGGTACCTCAAAAT CTATGACTCTCTTTGTCCAGAGAACTGTAAAGTATACTTGCCCGACGGACTTGAGTTTCCCTTCGAAAATATTCGATATC TTCACTGGGAGAACATTGAACTGAAGGAGCTTCCATCAGATTTCAACCCAAAAAATCTTATTGATCTTAGGCTGCCTTAT AATAGGAAGATTGAACGTGTTTGGGGAGCTGTTAAGGTGTGTGTCTTTATGTGCATTTTTCATTACTACAGTGGACTATG A |
| AA seq | Len:427 aa MNHRIKQLQEMIDFNCDQTQIVGIVGMPGIGKTTLAEEYFERSNDRYSFNKIISDIRERGHHHLECKLLEGQKLNDEAII FSKKSFLVLDDVSQKKHIEFLLQNRRRIKKGSKIVITTRDKSSIAEFSPEIYVVPPLNDTVAWQLFNDHAFKGGASSTKG NFPKLTQKFVDYAGGNPRALEELGKELNGKDEAEWVTRLENLPYQCNSIIKKELKISYEELTEQQKDAFLDIACFFRSEE ENYVKCLLDSECGDVVKKLAEIFFICISGGKIEMHNLLCAFGKELRSGERMCDHRKTTTILRDAVQQETKDVRGIFLDTC TETKGISVDSKRFTEKFNPMNLRYLKIYDSLCPENCKVYLPDGLEFPFENIRYLHWENIELKELPSDFNPKNLIDLRLPY NRKIERVWGAVKVCVFMCIFHYYSGL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |