Names & Information
Knowledge of Bnascaffold1862G0000100GG:
| Gene Name | Bnascaffold1862G0000100GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable WRKY transcription factor 16 [Brassica rapa] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1 |
| NT seq | Len:2508 nt ATGGCAAGAACTAGCGTCAAGACAACAGTAACAGAGCAAGCAAGACTGTCCCCTTTTTCCAGAGGGTCAAGCCACCACGA TGTCTTTATCAGCTCTAGCTGCGACGGCACCCGCGACACCTTCGTTAGCCACCTTTCCGCCGCTTTAAAGCGCGTAAACA TCACTGTGATGGAGGAAGATGACAAAAACAAGGTGCCTGAAACCAGACAGTATTTACCCAAGAAAACTAGACTGGGGATA GAGAGATCCAAGATCTGTGTTGTTGTTCTCTCTGAGGACTTCGCGTCCTCCAAACATTGCCTGACTACTCTTGCGGAGAT TATTGAGTGGCGGCATAGCAAAACAGGAGCCACGGTGGTTCCAGTCTTTTATGGCGTAGATCGCTCCTTAGTGGAGCAAC AAATTGAGAAATACGGTGAGGCATTTTCTAAGCACGAGGCATCTGAGCCTAAAGATCGTGTGACCGAATGGAGAAACGCT CTAACGGAAGCAGCAAGCATAAACGAAGGTCTCCACTCAAATGCCGAATCCAGTGACTTAAAACTTATGGAAGATATTGT CTCATACATACATGGGCGGCTATTTCCAGCGGACAAGATCGGGGTAAGTTCGAGAGTGTTGGAGATAGAAAACTTGCTCA GTAAGCAACCATGGGTTGTCCGCAGCGTAGGAATTTGGGGGATGCCCGGTATAGGCAAGACCACCATTGCAAAAGCAGCC TTTGACCAGATGAAAGGGAACTTCAAATCTCGTAGTCGCTTCATCCAAAACTTCGAGAGAGAGTTTGAGAAGGAAGGAAT GTCTCGTTTAAGAGGGCAACGCTTACCATCACATGTGAAGGAGAAGCTTGACCTCAACAGGTCAATTACTAACAACAGCC AAAGAGAAGAAAGTGTGTTCTTAGTTCTTGATGATGTGCGGAACCCTATAAACGCAGAGTCTTTTCTTGGAGGGTTTGAG TGGTTTGATCCAGGAAGTGTGATAATCATTACTTCCAGAAATAAACAAGTGCTTGTTCAATGTAGAATGGTTGAAATATA TGAGGTGAAAGGTTTAGATGATAAGGAAAGTCTGAAGCTATTTTCCCAGTGCGCGTTTGGAGAGCCCAAACCTGAAGATG GCCACCTGAAAGTGTCAGAGATGATCGTTAAATATGCTAACGGAAACGCTAAGGCTCTAAGCCACTATGGAAATGAGCTA AAGGGAAAGAAACCAGAAGAAATGGAGATAGAGTTTTGCAAACTCAAGCTAAATCCTCCTGCTGAGATTCTTGAAGTATT CAACAACAGTTATAATGAACTTAGTGACGACGAGAAGAACATATTTATGGACATTGCCTGTTTCTTCAAGGGAGATAACG TTGATCGTGTGATGCAAGTGCTTGATGGGTGTGGTTTCTTCCCGTGTATTGGGATTGATTATCTTGTTGAGAAGTCTCTT GTGACTATTCGTGGAAACAAAGTCGAAATGCATTATCTAATACAAGACGTGGCCAAGAAAATCCTTTGTCAAGAAGTAAC GGTTGGGATGGGTCGCAGACTTTGCGGCGTTAAGAGCATTCAACCTCTTCTAGACAATGAAGAAACCAAAACAAATGGGG AAGACAATGAAAGGGAAGACATTGAGAGCATATTACTGGAAGCATCTGGTTTGAGCTTTGTTGTTGACCCTGGTGCGTTT CAGGATATGTGTAATCTTCGACTGCTTAAAATTTACAGCTCAGATCCTGAAAGGCGTCCTGGACTCGATCTTTCCATGGG TCTACTATATTTGCCTTACGAGCTACGGCTTCTCCATTGGGAGAATTACGCTTTGCGAACCCTGCCTGAAGATTTTGATC CTGACAACCTTGTGGAATTGAATATGCCTTACAGTCAACTTGAGGAACTTTGGCAAGAATCCAAGAACCTCAACTCTCTG AAGACAATCAATCTTCATCACTCTGAGAAACTAGTTGACATCCAGGAACTTAAAGACGCTCACTATCTTCAGCTAGTCGA TCTACAAGGCTGTACTAGCCTGCAGATCTTTCCAGTCATAGAGCATTTAAATCACCTCCAGGTTCTCAATCTCTGTGGCT GCATAGGGATCAAAATGTTTCCAGAGGTTCCACAAAACATCAAAGAACTGTCTCTCAAAGGAACCAGCATAAGTGAAATA CCCGCATCTATTGAGTCCCTCTCAAAACTAGTCAAGCTGGACCTAGGGAACTGCAAAGAGCTTCTTAATTTTCTACTAAA GATCTTCAACATGGAGTCTCTTCAATTTCTCAATCTTTCTGGATGTGAAAAGCTCAAGAGCTTCCCTGAGATCCCAAACC GAGTAGAGAATCTCCAGTATCTCTATTTAAGCGGTACAGCCATTGAGGAATTACACACTTCACTTTCAAACATGGTTTGT CTAAAAGTGCTTGAAGTGAGTAAGAACCTTAAGCCGCCTTTCAGCATGAAGGACTTAAAGGATCTGAAGGTCGTTGAAAT AGATGAAGAGATTCACAAAACCTCTTGA |
| AA seq | Len:836 aa MARTSVKTTVTEQARLSPFSRGSSHHDVFISSSCDGTRDTFVSHLSAALKRVNITVMEEDDKNKVPETRQYLPKKTRLGI ERSKICVVVLSEDFASSKHCLTTLAEIIEWRHSKTGATVVPVFYGVDRSLVEQQIEKYGEAFSKHEASEPKDRVTEWRNA LTEAASINEGLHSNAESSDLKLMEDIVSYIHGRLFPADKIGVSSRVLEIENLLSKQPWVVRSVGIWGMPGIGKTTIAKAA FDQMKGNFKSRSRFIQNFEREFEKEGMSRLRGQRLPSHVKEKLDLNRSITNNSQREESVFLVLDDVRNPINAESFLGGFE WFDPGSVIIITSRNKQVLVQCRMVEIYEVKGLDDKESLKLFSQCAFGEPKPEDGHLKVSEMIVKYANGNAKALSHYGNEL KGKKPEEMEIEFCKLKLNPPAEILEVFNNSYNELSDDEKNIFMDIACFFKGDNVDRVMQVLDGCGFFPCIGIDYLVEKSL VTIRGNKVEMHYLIQDVAKKILCQEVTVGMGRRLCGVKSIQPLLDNEETKTNGEDNEREDIESILLEASGLSFVVDPGAF QDMCNLRLLKIYSSDPERRPGLDLSMGLLYLPYELRLLHWENYALRTLPEDFDPDNLVELNMPYSQLEELWQESKNLNSL KTINLHHSEKLVDIQELKDAHYLQLVDLQGCTSLQIFPVIEHLNHLQVLNLCGCIGIKMFPEVPQNIKELSLKGTSISEI PASIESLSKLVKLDLGNCKELLNFLLKIFNMESLQFLNLSGCEKLKSFPEIPNRVENLQYLYLSGTAIEELHTSLSNMVC LKVLEVSKNLKPPFSMKDLKDLKVVEIDEEIHKTS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16225 probable WRKY transcription factor 52 (A) |