Names & Information
Knowledge of Bnascaffold2129G0000300GG:
| Gene Name | Bnascaffold2129G0000300GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At1g50180 [Brassica rapa] |
| Best Hit (SwissProt) | Putative disease resistance protein At1g50180 OS=Arabidopsis thaliana GN=At1g50180 PE=3 SV=2 |
| NT seq | Len:2679 nt ATGTTCCTTTTCTTCTCAACTTTCTCCTCTCAATTTCTCTTTTTTTTTTTGTTTTCCAGCAATCTCAGAGCGGATGCTCG TGTTTCGTCTTCTTCTTGTGAGATGATTACTCGGACGAATCGGCCATGGGCTTTGCCATGTTCCTTGAAAGTTGACAACT TTCAGTTCCAAAGAACAACGAGAAGAGGATCTCCATGTTTGGCGAGGTTCGAGAATGGCGAGTTGCTCAGAAGTGGGATT GGTGATGCTGATGGGATTATAATCGTAGACCACGGTTCTCGTCGCCGAGAATCTAATATCATGCTTGAGGAGTTTGTGAA GATGTTCAAAGACAACACTGGCTACCCTATTGTGGAGCCTGCTCATATGGAATTGGCTGAGCCGTCTATAAAAAGTGCAT TCAGTCTGTGTGTACAACAAGGAGCGAAACGTGTTGTTGTTAGCCCGTTTTTTCTGTTTCCTGGAAGACATTGGCATCAG GACATTCCTGCTTTGACGGCTGATGCTGCAAAGGAGTTCCCTTCCATCTCATACCTCATTACTGCACCTCTCGGCCTCCA TAATCTCCTCATCCAAATTAAGAAAGCCAAATCTGGTGTTTTGCATATCAGCCACAGTTCATGCTATAAAGATGAGAACC AAAGGATACTTAGCTTGAGAGATGAACAGCTTGGAGAGGAGTTGCATCGGTTCTTGAAAAGGACTAAATGTCTCGTTGTG CTTGATGATATATGGGGCACTGATGCTTGGGATGGTCTGAAACATGTCTTTCCACATGAAACAGGAAGCAACATAGTACT CACCACAAGGAACAAAGAGGTTGCTTTGTACGCTGATCCGAGAGGTGTACTCCATGAGCCGAGATTGCTAACACATGAAG AGAGTTGGGAGCTGTTGGAGAAAATTTCATTACAGGGACGAGATAATTTAGAGCCAATGTTGGTCAAGAAACTGGAGGAG ATTGGGAAACAGATGGCCATAAAGTGTGGAGGTTTACCTCTAGCTATAACGGTTCTAGGAGGACTTTTGGCGATGAAAAA CACATTGAACCAATGGCAGAGAGTGCAAGAGAACATCACACCATATGTTTCAAATGGAGGAAGTAGCAATGGAAGTAAGA GTATGATGGTTGCAGATGTGTTGTCCTTGAGTTATGAGGACTTGCCTGCCCATTTGAAGCAGTGTTTCCTATACTTTGCT CACTATCCTGAAGATTTTGAGGTTCATGTGGGAACATTGGTTAGTTACTGGATCGCAGAGGGAATGGTTATGCCTGTAAA ACACACGGAAGAATCTGGGATGACAGTAGAGGATATAGGGCAAGATTACCTTGAAGAGTTGGTAAAGAGAAGCATTGTGA TGGTTGGGAAAAGAGACATTGTAACCTCGGAAGTGATGACATGCCGTATGCATGATCTAATGAGGGAGGTGTGTTTACAG AAAGCTGAACAAGAAAGCTTTGTGCAAGTTGTTGATTCAAGGCAACAAGAAGAAGATGAAGCTTTACGGTCTCTTTTGAC CAATACATCTCGCAGAATCTCTGTACAAATACATGGTGGTGCGGAGGAACACCGGATCGAGAGACTTTACATGAGTTCTC AGTGTAGATCTCTTGTGTATTTGATGAAAAATCAAGGAAGTCAATGGACACTTCTTGGTAAGGTCTCCTTCAGAAAGATG AAACTCCTTAGAGTTTTAGATCTTGAGGGAGCTCAGATCAAAGGAGGGAAGTTGCCAGATGATGTAGGAGATCTCATCCA TTTGAGAAACTTTAGTTTGAGGTTGACAAATGTGAAGGAAGTTACATCATCTATTGGAAACTTAACGTTGATGATTACTC TAGACTTGTTTGTGAAGGGGAAACTGTATATTCCAGATGTGATATGGAAGCTAAAGCGGCTGAGACATCTGTGCATGCCT TCAGAGCTTGATCCAAGAACGAAGCTGGACTTGAGTACTCTAAGGAACCTGCAACAGCTCTGGGACTTCCCTGTTGGACA ATGCAATCCAAGGGATCTTCTGGCAATGATGAGTCTCAGAAGATTGTCCATCAATCTTTCTTCTCAAAACACAGACTTTG AGGTTGTGTCTTCTTTGAGTAGAGTCTTGAAACGTCTCCGTGGCTTGACGATTAACGTTCCCTGCGAACCTATGCCTCCA CCAGTTGATATAACACAGTTGGTTTCTGCTTTTGCTAATCTCTCCGAGCTGGAACTCTTCCTTAAACTAGAAAAGCTCCC TGGGGAACAGAGTTTCTCCTCTGATCTCGGTGCCTTGCGGTTGTGGCAATGCGGGTTAGTGGATGACCCGTTTTTGGTTC TTGAGAAGCTTCCGAACTTAAAGATTCTTCAGCTGTTTGAAGGATCATTTGTTGGTAGTGAACTTCATTGTTCTGTAAAT GGTTTCCCTCAGCTGCATTCTTTGACATTGTCACAGCTTGAGAATCTAGAAGAGTGGACTGTAGAAGACGGTGCCATGAT CCGTCTTGTTTCTTTGGAACTGAAGTGTTGTAAGAAATTGAAGTCGGTTCCTGAAGGAACGAGGTTCTTGAAGAATCTAC AAGAAGTGGAGATTGGGAACATGACAAAAGCATTCAAAGACAAGCTGGCGTCTGGTGGTGAAGACTTTTACAAGATTCAA CATGTGCCTTGTGTTGTTTTTGAGTATTGTGACCTTTAA |
| AA seq | Len:893 aa MFLFFSTFSSQFLFFFLFSSNLRADARVSSSSCEMITRTNRPWALPCSLKVDNFQFQRTTRRGSPCLARFENGELLRSGI GDADGIIIVDHGSRRRESNIMLEEFVKMFKDNTGYPIVEPAHMELAEPSIKSAFSLCVQQGAKRVVVSPFFLFPGRHWHQ DIPALTADAAKEFPSISYLITAPLGLHNLLIQIKKAKSGVLHISHSSCYKDENQRILSLRDEQLGEELHRFLKRTKCLVV LDDIWGTDAWDGLKHVFPHETGSNIVLTTRNKEVALYADPRGVLHEPRLLTHEESWELLEKISLQGRDNLEPMLVKKLEE IGKQMAIKCGGLPLAITVLGGLLAMKNTLNQWQRVQENITPYVSNGGSSNGSKSMMVADVLSLSYEDLPAHLKQCFLYFA HYPEDFEVHVGTLVSYWIAEGMVMPVKHTEESGMTVEDIGQDYLEELVKRSIVMVGKRDIVTSEVMTCRMHDLMREVCLQ KAEQESFVQVVDSRQQEEDEALRSLLTNTSRRISVQIHGGAEEHRIERLYMSSQCRSLVYLMKNQGSQWTLLGKVSFRKM KLLRVLDLEGAQIKGGKLPDDVGDLIHLRNFSLRLTNVKEVTSSIGNLTLMITLDLFVKGKLYIPDVIWKLKRLRHLCMP SELDPRTKLDLSTLRNLQQLWDFPVGQCNPRDLLAMMSLRRLSINLSSQNTDFEVVSSLSRVLKRLRGLTINVPCEPMPP PVDITQLVSAFANLSELELFLKLEKLPGEQSFSSDLGALRLWQCGLVDDPFLVLEKLPNLKILQLFEGSFVGSELHCSVN GFPQLHSLTLSQLENLEEWTVEDGAMIRLVSLELKCCKKLKSVPEGTRFLKNLQEVEIGNMTKAFKDKLASGGEDFYKIQ HVPCVVFEYCDL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | CbiX |
| KEGG | Disease resistance protein RPH8A, putative; K13457 disease resistance protein RPM1 (A) |