Names & Information

Knowledge of Bnascaffold2414G0048900ZY:

Gene Name
Bnascaffold2414G0048900ZY
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
PREDICTED: probable disease resistance protein At4g33300 [Brassica rapa]
Best Hit (SwissProt)
Probable disease resistance protein At4g33300 OS=Arabidopsis thaliana GN=At4g33300 PE=2 SV=3
NT seq
Len:2463 nt

ATGGCCGTCACCGATTTTTTCGCCGGCGAAATAGCGACGGAGCTTCTGAAACAGCTCTTCTCCATATCCACCAAAGCATG
GAAATACAAAAACATCGCCGACAGACTCATCGCCTTGATCGAGACAATCCAGCCCACGATCAAGGAGATTCTATACAGCG
GCGTGGAGCTTCCTCCTCACCGCCAAGCTCAGATCGGTATGCTCTTTAGCACCCTCGAGAAAGGCCATAAACTCACTGAG
AGAGTCTTGAGCTCCCGTCGATGGAACATGTATCGACAGTTCACACTAGCGAAGAAGATGGAGAAGCTTGAGAAGACGAT
CTCTGATTTTATGAAGAATCAGGTATTGACTCATATCTTAGCTGATGTTCATCAGCTCCGGGCCAACGCCGACGTGAGGT
TTGATAGAGTTGAGAGGAGCCTCACTGGCCTCGAGGAGCAGTTAGGTTCTATGAAGATCGGAGGAGGAGGGATGATAAGG
GATGCGATGAAGATAGCCGAGGCTACGATGGAGATTGAGACGAGCAGTGAGGATGAGAAGTTTGGGGTTGGGTTGGAGAT
GGGAAAGAGGAAGGTGAAGAAGATGATGTTCAACGCTGAAGGAGGTCTTTTCGGGATTAGTGGTATGGGTGGTGTCGGTA
AAACCACTCTTGCTAGAGACCTTGAACGTGACAATGATGTCCGATGTTACTTTGAGAAGATTTTGTTTCTGACTGTATCA
CAATCCCCGCTAGTTGAGGAGCTGAGAGCACATATATGGGGTTTTTTGACCGGTTGTGAAGGTGTAGATCATGTTCAAGA
CTGGAATTTACAGTATAACGGTGGGGTTAAAACAAAGAAGCTGGTGATTCTTGATGATGTTTGGACAAGAAAAGCTTTGG
ACAGCTTGACTTCTAACCTTCCTAGTTGCACAATTCTTGTGGTTTCGCGGTCCAAACTCGCAGATCCTAATGCTACTTAT
GATGTTGAAGTGCTAAGGGAAGATGAAGCTATCTCTCTCTTTTGTCTCTGTGCGTTTGGTCAGAAATCTCTTCCTCCTGG
TTTCGACAAAGACCTTGTTAAGAAGGTTGCTGGTGAGTGTAAAGGTCTACCTTTGGCTCTCAAAGTTACGGGCGCTTCAC
TAAAAGACCGCCCTGAAATGTATTGGCAGGGCGCATTGCAGAGGTTATCAAAAGGTGAACCTGCTGATGAAACTCACGAG
ACTAGATTGCTTCATCACATGGAAGCTAGTCTAGCAGATCTGGACGAGACAGCCAGAGAGTGTTTCTTGGATCTTGGCGC
ATTCCCTGAAGACAGGAAGATTCCTGTTGATATTCTCATCAACATGTGGATTGAAGTACATGATCTAGACGAGGCAGTTG
CTTTTGCCACTCTTGTTGATTTGTCACACAAGAATCTCCTTACTCTTGGGAAAGATCCACGGCTTGGCTCTACGTATGCA
AGCTACTATGATGTATTTGTGACACAGCATGATGTTCTGCGTGACTTGGCACTTCATTTATCCAACAAAGGGAAAGTAAA
CAGAAGAAGGCGATTGCTGATGCCAAAAAGAGAGGAAGAGCTTCCGAAAACATGGGGAAAGAACTGTGATGAGGAATACA
ATGCAGAGATAGTCTCTATTCATACATGGGAAATGGATGACATGGATTGGTCTGACTTTGACATGGACTTCCCTAAGGCA
GAGATTCTAATATTGAATTTTTCCTCGGACAAGTATGTTTTGCCTCCTTTCCTCAGCAAGATGACCCGGCTTAAGGTCCT
CGTGATCATCAACAACGGCATGTCCCCTGCGATTCTCCGTGACTTTTCAATGTTTGCCAACTTGTCGAAACTAAGGAGTC
TCTGGCTCGAGAGAGTTCACGTCCCTGAGCTCTACAACACAACAATCCCCCTGAAACATCTCCACAAGATGTCTCTGATT
CTGTGCAAGATCAATAACAGTTTCGATCAGACCGGAGTCGACGTCTCCTGTATCTTCCCAAAGTTGGGAGACCTGACGAT
AGATCACTGTGATGATCTCGTGACACTGCCTTCAAGCATCTGCAAAATGACCTCTCTTAACTCATTAAGCATAACAAACT
GTCCACGCCTCGGTGAATTGCCTAAGAACCTAAGCAAGCTACAAGCTCTTGAGCTTCTGAGGCTATATGCTTGCCCCGAG
CTAAAGGCATTACCTGATGAAATCTGCGAGCTTCCTCAGCTTAAGTACCTCGACATCTCGCAGTGTGTTAGCCTGAGTTG
TCTTCCGGAGGATATAGGAAAGCTAAAGACACTTGAAAAGATTGACATGAGAGAATGCTACATCGCTGGTAGAGTGAGCT
CCGCTGTTTCGTTGGAGTCCCTACGCCATGTGATTTGCGATGAGGACGTTGCGTTTATATGGGAAGAAGTTGAGAGGGCC
GTTCCAGGGTTAAAGATTGAAGCTGCTGAGAAATGTTTCAGTTTAGATTGGCTCGACGAGTAA
AA seq
Len:821 aa

MAVTDFFAGEIATELLKQLFSISTKAWKYKNIADRLIALIETIQPTIKEILYSGVELPPHRQAQIGMLFSTLEKGHKLTE
RVLSSRRWNMYRQFTLAKKMEKLEKTISDFMKNQVLTHILADVHQLRANADVRFDRVERSLTGLEEQLGSMKIGGGGMIR
DAMKIAEATMEIETSSEDEKFGVGLEMGKRKVKKMMFNAEGGLFGISGMGGVGKTTLARDLERDNDVRCYFEKILFLTVS
QSPLVEELRAHIWGFLTGCEGVDHVQDWNLQYNGGVKTKKLVILDDVWTRKALDSLTSNLPSCTILVVSRSKLADPNATY
DVEVLREDEAISLFCLCAFGQKSLPPGFDKDLVKKVAGECKGLPLALKVTGASLKDRPEMYWQGALQRLSKGEPADETHE
TRLLHHMEASLADLDETARECFLDLGAFPEDRKIPVDILINMWIEVHDLDEAVAFATLVDLSHKNLLTLGKDPRLGSTYA
SYYDVFVTQHDVLRDLALHLSNKGKVNRRRRLLMPKREEELPKTWGKNCDEEYNAEIVSIHTWEMDDMDWSDFDMDFPKA
EILILNFSSDKYVLPPFLSKMTRLKVLVIINNGMSPAILRDFSMFANLSKLRSLWLERVHVPELYNTTIPLKHLHKMSLI
LCKINNSFDQTGVDVSCIFPKLGDLTIDHCDDLVTLPSSICKMTSLNSLSITNCPRLGELPKNLSKLQALELLRLYACPE
LKALPDEICELPQLKYLDISQCVSLSCLPEDIGKLKTLEKIDMRECYIAGRVSSAVSLESLRHVICDEDVAFIWEEVERA
VPGLKIEAAEKCFSLDWLDE*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0006952
Pfam
Arabidopsis broad-spectrum mildew resistance protein RPW8
KEGG
SORBIDRAFT_05g008280, Sb05g008280; hypothetical protein; K13457 disease resistance protein RPM1 (A)