Names & Information

Knowledge of Bnascaffold2414G0049000ZY:

Gene Name
Bnascaffold2414G0049000ZY
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
BnaC01g04900D [Brassica napus]
Best Hit (SwissProt)
Probable disease resistance protein At4g33300 OS=Arabidopsis thaliana GN=At4g33300 PE=2 SV=3
NT seq
Len:1044 nt

ATGAAGAATCATATATTCGTTCACATCTTAGCTGATGTTCATCAGCCCCGGGCTAATAACGCCGATGTGAGGTTTGATAG
AGTTGAGAGGAGCCTCACTGGCCTCGCGGAACAGTTAGGGTCTATGAAGATTGGAGGAGGAGGGATGATAAGAGATGCGA
TGCAGATAGCTGAGGCTGCGATGGAGATTGAGACGAGTGATGGCGATGAGAAGTTTGGGGTTGGGTTGGAGATGGGAAAG
AGGAAGGTGGGATTAGTGGAATGGGTGGTGTCGGTAAGACCACTCTTGCTAGAGACCTTGAGCGTGAGCGTGACAATGAA
GTCCGATTATGACGGTGGGGTTAAAACAAAGAAGCTGGTGATTCTTGATGATGTTTGGACAAGGGAAGCTTTGGACCACT
TGACGTCTAACCTTCCTGGTTGCACAACTCTTGTGGTTTCACGGTCCAAACTCGTAGAGCCTAATGCTACCTACGATGTG
GAAGTACTAAGGGAATATGAAGCTATATCTCTCATCTGTCTCTGTGCGTTTGGTCAGAAGTCTGTTCCCCCTGGTTTCGA
CAAAGACCTTGTCAAGAAGGTTGCTGGTGAGTGTAAAGGTCTACCTTTGGCTCTCAAAGTTACGGGCGCTTCACTAAAAG
ACCGCCCTGAACAGTATTGGCAGGGGGCATTGCTGAGATTATCAAGAGGTGAACCTACTGATGAAACTCACGAGACTAGG
TTGCTTCATCGCATGGAAGCTAGTCTAGAAGATCTAGATTCAACAGCCAGAGAGTGTTTCTTGGATCTTGGCGCATTTCC
TAAAGACAGGAAGATTCCTGTTGATGTTCTCATCAACATGTGGACTGAGATGCATGATCTAGACGAGCTTGGCTCTTTGT
ACGCAAGCTACTATGATGTATTTGTGACACATCATGATGTTCTGCGAGAAAGGGAAATGGGAGACATGCATTGGTCTAAC
TTTGACATGGACTTCCCTAAGGCAGAGATTCTAATATTGAATTTTTCCTCAGACAAATTTTGCCTCCTTTCCTCAGCAAG
ATGA
AA seq
Len:348 aa

MKNHIFVHILADVHQPRANNADVRFDRVERSLTGLAEQLGSMKIGGGGMIRDAMQIAEAAMEIETSDGDEKFGVGLEMGK
RKVGLVEWVVSVRPLLLETLSVSVTMKSDYDGGVKTKKLVILDDVWTREALDHLTSNLPGCTTLVVSRSKLVEPNATYDV
EVLREYEAISLICLCAFGQKSVPPGFDKDLVKKVAGECKGLPLALKVTGASLKDRPEQYWQGALLRLSRGEPTDETHETR
LLHRMEASLEDLDSTARECFLDLGAFPKDRKIPVDVLINMWTEMHDLDELGSLYASYYDVFVTHHDVLREREMGDMHWSN
FDMDFPKAEILILNFSSDKFCLLSSAR*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0006952
Pfam
NB-ARC domain
KEGG
Disease resistance protein RPH8A, putative; K13457 disease resistance protein RPM1 (A)