Names & Information
Knowledge of Bnascaffold2866G0000100WE:
| Gene Name | Bnascaffold2866G0000100WE |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Brassica rapa] |
| Best Hit (SwissProt) | Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis thaliana GN=SNC1 PE=1 SV=3 |
| NT seq | Len:3622 nt ATGAAGATAGTGATAATGTCAAGACGATTTCATAGCTTTTTCTACACGAACAATTTTCCACATGCAGTTGAAGGAGAACT TTTCAAGAATGAGAAGCCTTATACGACTCCAAGTCCAGAGCCTGAAGATGTTTATAAATTCTTCTTTTGCAGGAGGCTAA GCGCTCTGTTCAAAGATGTAAATAGATATCTTCCAATCAGAAAAGCCACAAACATAGTCTTCTCTAAAAGTTATGCTTCA TCCAGCTGGTGCTTGAATGAGTTGGTGGAAATCCACAAGTGCTATATGGAGGTGGATCAGACGGTGATTCCTATTTTCTA CGGCGTTGATCCTTCTGATGTTAGAAAACAGACAGGAGAGTTTGGAAAGGCCTTTGGAGAGACAAGCAAGGGCACAACAG AGGATGAGAAACAAAGGTGGATGCGAGCTCTAGCTGAGGTAGCAAATATGGCCGGAGAGGATCTTCAAAACTGGTGTAAC GAAGCCAACTTGATTGATAAGATAGCCGACAATGTTTCGAATAAACTTATTACACCATCGAATTATTTTGGTGATTTCGT TGGGGTCGAAGCTCATTTAGAGGCAATGAATCAATTGTTGTGCATTGAATCTGAGGAAGCTAGAATGGTGGGGATTGTAG GGCCTTCAGGGATTGCTTATAGGAGAACCATCCAAGATGACTATGGCATGAAGTTGTGTTGGGAAGAACGGTTTCTCTCA GAAATTCTGTGTCAAAAGGAATTAAAGATATGCTATTTAGGTGTGGTGAAGCAAAGGTTAAAACTCAAGAAAGTTCTTAT TTTTCTTGACGATGTTGATGACGTAGAGCTACTCAAGACCTTGGTAGGACGAACTAAATGGTTTGGATCAGGGAGCAGAA TTATTGTCATATCTCAAGATAGGCAACTTCTCAAGGCTCATGATATTGACCTTGTTTATAAGGTGGAGTTCCCATCTGAA GATGTTGCTCTCAAAATGCTTTGTCGATCTGCTTTCGGGCAAAACTCTCCACCTAATGGTTTCATGGAACTCGCAGTTGA AGTTGCAAAGCTTGCCGGTAATCTTCCTTTGGGTCTCAATGTCTTGGGTTCGTCTTTACGAGGAAGGGGCAAAGATGAGT GGATGAAGATGATGCCTAGGCTTCGAAATTATTTGGACGGTAAAGTTGAGAAAACATTAAGAGTCAGCTACGATAGGTTA GATGGCAAAGACCAAGAGTTATTTCTCTTCATTGCATTTGCACGTTTATTCAATGGTGTGCAAGTCAGTTACATAAAAGA CTTGCTCGGAGATAGTGTTAACACTGGGCTTAAAACGTTGGCTGATAAGTCCCTCATACGTATAACATCGAATGAAACTA TAGAGATGCATAACTTGCTACATAAGTTGGCTAGAGAAATTTTCCGTGCAGAGTCCATAAACAATCCTGGAAAACGCCGG TTTCTGGTGGATGTTGAGGACATTCGCGATGTATTTACAGATAAAACCGGCACGGAAACTGTTCTAGGACTATATTTCAA CGCATTAAAACTCGAGGAACCATTTTCAATGGATGAAAAATCGTTTGAAGGCATGTGTAATCTCCAGTTTCTCATAGTCA GAGACTATGTTGGTTACTGGGTTCCACAGGGAAAATTGCATCTACCTCAAGGCCTCTTTTATTTACCCCGTAAACTCAGA TTGCTCAGGTGGGATGGTTATCCATCCAAGTGCTTGCCTTCTAATTTTAAGGCAGAGTATCTTGTTGAACTCAGAATGAA GAATAGTTCGCTTGAGAAGCTGTGGGAAGGAACTTTGCCACTTGGAAGACTCAAGAAGTTGATTATGAGTTGGTCCACGT ACTTAAAAGAACTTCCGGATCTCTCTAATGCCAAAAGCCTCGAGGAAGTATATCTTGATAGATGCACATCTCTGGTGACA TTTCCTTCCTCGATTCAGAATCTCCATAAACTGAGGGAGTTGGATTTGGAAGGGTGCACAGAGCTAGAAAGTTTTCCAAC TCTTATCAACTTGAAATCTCTCGAGTACCTCAATCTCAGAGAATGCTCCCGGTTGAGAAATTTCCCTCAGATATATATAA ACAGTTCTCAAGGATTTAGCCTCGAAGTAGAAGGCTGTTTCTGGAACAATAATCTCTGTGGACTCGATTATCTCGGCTGC ATTATGAGATGTATTCCCTGTAAATTTCGCCCAGAACAGCTCATCGGTCTCACAGTGAAAAGCAACATGCTTGAGAGGCT ATGGGAAGGCGTCCAGTGTCTTGGAAGTCTCGAAATGATGGATGTGTCAAGCTGTGAAAACCTTACAGAGATTCCAGATC TTTCAATGGCCCCCAATCTCATGTATTTGAGACTCAACAATTGCAAAAGTTTGGTGACTGTTCCTTCTACAATTGGGAGT CTCTGTAAACTGGTGGGGTTGGAAATGAAAGAATGCACAATGTTGGAGGTTCTTCCAACTGATGTCAACTTGTCATCTCT CAGAACACTCTATCTCAGTGGGTGCTCAAGGTTGAGAAGTTTTCCTCAGATTTCAAGGAGCATTGCAAGTCTATATCTAA ATGACACCGCCATTGAAGAAGTTCCCTGCTGCATAGAGAATTTCTGGAGGCTCTCTGAACTATCGATGTCTGGTTGCAAG AGGTTGAAAAATATATCTCCGAACTTTTTCAGATTGAGAAGTCTTCATCTAGTAGACTTTTCAGATTGTGGAGAAGTCAT CACGGTACTGAGTGATGCCAGCATCAAGGCAAAAATGTCAATAGAGGATCACTTTTCTCTTATACCATTATTTGAAAACA CTGAAGAGCGTTACAAAGATGGAGCGGATATAGACTGGGCCGGTGTTTCAAGAAACTTCGAATTTTTAAACTTCAATAAT TGCTTTAAACTAGATAGAGATGCGCGGGAACTCATCATACGATCATACATGAAGCCTACGGTCTTACCAGGTGGAGAAGT GCCTACGTATTTCACGCATCGAGCTTCTGGGAATTCTCTAGCTGTTACTTTACCTCAGAGCTCTCTTTCTCAAGACTTCT TGGGATTTAAGGCTTGCATCGCTGTTGAACCTCCAAACAAAGCCGAAACTCCTTATGTACAAATGGGGTTGCGCTGGTAC TTTAGAGGCAGAAGCAGTGTGCATCATTTTACGGTTTACCACCACTCATTTAAGATGGATGAGGATCATTTGCTTATGTT CCACTTTGGTTTCCCTCTAGAAGAAGTCAATTATACTTCATCTGAACTAGACTATATCCATGTGGAGTTTGAATATTGCT ACCACAAGTATGCTTGTTCTGACATATATGGGCCTGACAGCCACACGCAACCTTGTCTCATGTCGCTCAAGATGATAAAA GGGTGCGGTTTACGGCTCTTGAATCTCTCCGGATCTCCATATGGTGCTGTTAGAATCTCTGAAACAGAGTACAGCCAGCA GTCTGGAGAAAGTGACAGAGAGAGTGGAAGAAGCAATAAGCGAATGCGGATGATGGTAAGAACATCTGAAGAACCTTCCA GCTTACTATGTGGAAAAACAGGAGCGAACACAAGATTGATGACTCCAAATTTGGAGCTTTCATTAGGGCAGGGTGAAACT TCCACTCAGATGTCGTTGAGAA |
| AA seq | Len:1207 aa MKIVIMSRRFHSFFYTNNFPHAVEGELFKNEKPYTTPSPEPEDVYKFFFCRRLSALFKDVNRYLPIRKATNIVFSKSYAS SSWCLNELVEIHKCYMEVDQTVIPIFYGVDPSDVRKQTGEFGKAFGETSKGTTEDEKQRWMRALAEVANMAGEDLQNWCN EANLIDKIADNVSNKLITPSNYFGDFVGVEAHLEAMNQLLCIESEEARMVGIVGPSGIAYRRTIQDDYGMKLCWEERFLS EILCQKELKICYLGVVKQRLKLKKVLIFLDDVDDVELLKTLVGRTKWFGSGSRIIVISQDRQLLKAHDIDLVYKVEFPSE DVALKMLCRSAFGQNSPPNGFMELAVEVAKLAGNLPLGLNVLGSSLRGRGKDEWMKMMPRLRNYLDGKVEKTLRVSYDRL DGKDQELFLFIAFARLFNGVQVSYIKDLLGDSVNTGLKTLADKSLIRITSNETIEMHNLLHKLAREIFRAESINNPGKRR FLVDVEDIRDVFTDKTGTETVLGLYFNALKLEEPFSMDEKSFEGMCNLQFLIVRDYVGYWVPQGKLHLPQGLFYLPRKLR LLRWDGYPSKCLPSNFKAEYLVELRMKNSSLEKLWEGTLPLGRLKKLIMSWSTYLKELPDLSNAKSLEEVYLDRCTSLVT FPSSIQNLHKLRELDLEGCTELESFPTLINLKSLEYLNLRECSRLRNFPQIYINSSQGFSLEVEGCFWNNNLCGLDYLGC IMRCIPCKFRPEQLIGLTVKSNMLERLWEGVQCLGSLEMMDVSSCENLTEIPDLSMAPNLMYLRLNNCKSLVTVPSTIGS LCKLVGLEMKECTMLEVLPTDVNLSSLRTLYLSGCSRLRSFPQISRSIASLYLNDTAIEEVPCCIENFWRLSELSMSGCK RLKNISPNFFRLRSLHLVDFSDCGEVITVLSDASIKAKMSIEDHFSLIPLFENTEERYKDGADIDWAGVSRNFEFLNFNN CFKLDRDARELIIRSYMKPTVLPGGEVPTYFTHRASGNSLAVTLPQSSLSQDFLGFKACIAVEPPNKAETPYVQMGLRWY FRGRSSVHHFTVYHHSFKMDEDHLLMFHFGFPLEEVNYTSSELDYIHVEFEYCYHKYACSDIYGPDSHTQPCLMSLKMIK GCGLRLLNLSGSPYGAVRISETEYSQQSGESDRESGRSNKRMRMMVRTSEEPSSLLCGKTGANTRLMTPNLELSLGQGET STQMSLR |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | - |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |