Names & Information
Knowledge of Bnascaffold286G0023300WE:
| Gene Name | Bnascaffold286G0023300WE |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable WRKY transcription factor 52 [Brassica rapa] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1 |
| NT seq | Len:4326 nt ATGGATTCCCTCCTTGGGATCTGTGCTGCTGCTGCGATAGGATTCTTCACGATTCTCGTTACGCTATTACTTGCGTTTTA CAGAAGATTCAGATCCAATCGACGGAACGTGACAGTGGCGTCATCTTCTTCGTCGAGCTCCACTCCATCAAGCGATTTCG AAGCAGTGCCTAACGGATTACGACTACGCGCCGTTTACATCCACTGCGAAGAGACGTTACAGTACACCTTCGCTAGCCAC CTCTCCGTCGATTTCCGCCGGAAACGCATTGCTGCGTTTGTGAATTGCGATTTGAATCCGGATGTGGCAGAGGGAGCGAG CGCTTCTGTGGTGGTTTTCTCCAAGAGCTACTCGTCCTCCGCCTCATGCCTTGACAAGCTCGTGACGGTTCTTCGGTGCC GGAGGAATACCGGCCAGATGGTGGTGGTTCCGGTGTTCTACGGCATTAGTCCATCAGATGTTGCCGTGCGGGTGCACGGC TCAGCTGATCGGATAAGAGAGTGGAGCAACGCTCTCAGAGAACTGAGAGAGTTGCCAAGCCACCAGTGTAGTGAGGAATC TGATGAGGGCCAAGTGGTGGAAGAGATTGTCAAAGATGTGTATGAAAAGCTCTTTCCTACTGAACAGGTTGGAATCAACT CAAGGCTGGTGGAGATAGAACAGTTGCTTTGCAAGCAACCATGGGGTATACGCCGCATCGGGATTTGGGGTATGCCTGGC ATAGGCAAGACGACGCTTGCTAAAGCAGTTTTCGACGACATCTCTGGAGGCTATGAGGCTTCTTGTTTCATCAAACACTT TGACGAAGCTTTCAATGAGAAGGGACTTCACCGTTTGTTGGAGGAACATTTTGGGAAAATCCTCAAGGAACTGCCTCGTG TATGCAGTAGCATTACAAGACCTAGTCTCCGAGGGGAGATTTTAAGCAAGAAGAGGACTCTTGTTGTTCTTGATGATGTG AAAAATCCCTTAGCTGCCGAGTCTTTCCTCGGAGGGTTTCATTGGTTTGGTCCGGGTAGTTTAATCATCATAACCTCCAG AGATAAACAAGTGTACCGCCATCGTCAGATAAATCATGTGTATGAGGTTCGGAGCTTAAGCGAGAACGAGGCTTTGCAGC TGCTATCTCAGTGTGCATTTGGTAATGACATAAGAGATCAAAAACGCATGGAACTATCGATGGAAGTGATTGACTACGCT AGGGGAAATCCATTTGCTCTAAGCTTTTACGGCAGAGAGCTGAAGGGAAAGAAACCGTCAGAAATGGAGGCGACATTCCT CAAACTCAAGCTACGTACTCCATATAAGATTCATGATTTATTCAGCAGCAGCTACAAAACACTTGACGACAACGAGAAGA ACATTTTCTTGGACATTGCTTGTTTCTTCGTGGGAGAAGATGTTGACTATGTGATGCAACTGCTTGACGGATGTGGCTTC TTTCCACATGTTGGGATTGACGTTCTTGTGGAGAAGTGTCTGGTGACTATTTCAGAAAACAGAGTGATAATGCATAGAAT AATCCAAGACTTTGGCAGAGAAATAATCAACGGGGAATCAGTACAGATAGAGCGCCGTCGGAGACTGTGGGAGCCTTGGA CCATCAAGTTTCTACTTGAGGACGACAAACTTGAAGCAAATGGATATCCCAGAGAAACCTGCAAACGTCCTTTGGGCACT GAAGACATCGAGGGCATATTTCTAGACACATCGAGTTTACTCTTTGATGTGAAGCCCACTGCTTTTGATAATATGCTTAA CCTTAGATTCCTCAAGATTTACTGTTCCAGTCATGAAAACCAATATGGTCTCGGCCTTCCAAGAGGACTTGAGTCTCTGC CATATGAGCTAAGACTTCTCCACTGGGAGAACTATCCTTCAGAGTCCTTGCCACAAGAATTTGACCCATGCCACCTAGTA GAACTCAATATGTCTTACAGTCATCTTCAGAAACTTTGGGAAGGAACCAAGAACCTCGACATGTTGAAGACGTGTAAGCT TTGTTATTCCCAGCAGCTGACTGAGGTTGACGATCTTTCTAAAGCTCAGAATATCGAGCTAATTGATCTCCATGGCTGTA CAAAACTGCAGAGATTTCCAGCCACCGGTCAACTACGGCATCTCCGAGTTGTAAATCTTTCAGGCTGCACAGAGATCAGA AGTGTCCCAGAGGTTTCACCTAACATTGTGGAGCTTCATCTCCAGGGAACTGGCACAAGAGAATTACCAATATCTCTTGT GGCCCTTTCCCAAGAAGATGACCTGAACCTTGAGAAATTAACAACCCTGGCTCAGGTCGTCTCATCAAATCAGCATCTTC AGAAACTTGTCTTGCTGAATATGAAAGATTGTGTTCATTTGCAAAGCTTGCCTCACATGTTTCATTTAGAAACTCTCGAA GTTCTTGATCTGTCTGGATGCTCGGAGCTCAAGAGTATACAAGGATTCCCACGAAACTTAAAAGAGCTATATCTTGTTGG CGCTGCTGTCACAAAACTACCACCCCTTCCCCGGAGTATAGAAGTCTTGAATGCACATGGTTGTATGTCTCTTGTATCAA TTCCTTTTGGTTTCGAGAGACTTCCTAGGTATTACACATTCAGCAATTGCTTTGCTCTTTATGCACAAGAGGTCAGAGAA TTTGTAGCTAACGGTCTGGCTAATATAGAACGCATCGCGAGAGAGCATCAGCGGGAACTCAAGAAATCTCTGGCTTTCAG CTTCACTGTGCCTTCGGCTGTAAGTAAAAATTTCACTTGTGATCTGCAACCAGGGTCTTCTGTGATGATACAACTTGGTT CTTCTTGGAGAACCACACTCGGTTTTGCTGTCTTAGTCGAACTTTCATTTTTGGAGGATTACCAGGAGGCCACTGGTTTT GGAATCACTTGTGTTTGCAGATGGAAAGACAATGAATTCGTCTCTCATAGGCTGGAAAAAAGCTTTCACTGTTGGAATCC AGAGGACGGTGTTCCGAAAGATCACATGTTTGTCTTCTGTGATTTAAACATGCATCGGAGCACCTGCGAAGGAAATGACC CCGGTATATTGGCTGATCTTGTCGTATTTGAATTCTTTACTGTGAACAAGCAGAAGAAGCCTCTGGATGAGAGCTGCACA GTGAAGAAATGTGGAGTCCATGTGATTACTGCTGCAAATGGAGATGCAAGTTGTAACATGACTCAAGAGAGTTTTGGTAA CGAGGTTGAAGAAGAGTTGAGGGTGGTCTTTGATGTCTTGGACAAGAATGATAGAACTTTGTTTCTTTACATTGCGTGTC TGTTCAACGACGAGAAAGCTGATTTCTTAACACCGCTTATCCCTAGCACTGGCTTGGAGATTAGTTCTAGGCTCAAGTTC TTAGCCAGTAACTCTCTCATACATATATCTCCCTTTGGTATCACAATGCGGCATAGCTTACGTCAGAAAATAAGTAGGGA GATCGTCCATAGACAACCCACGTTGGGGAAGGACTTAATAAAGGACTCCACGTCACCTGCTTGGAAATACGACGTCTTTA TAAGTTTCAGCGGGGAAGATGACAGTAATAACAAACTCAGCAACCTTCTTGCAAAGTTCAAAGGTAAACTAATGAGTACA CCCCATAGATGCAAGTCGGTCACACCAGAGCTTGTGCAAGCAATAAGAGCATCGAAAGGTTCGATTGTCTTGCTCTCAAA GAGCTACGCCTCTTCGAGTAGGTGCTTGGATGAGCTGGTAGAGATTATGAATTGCAATAAAGAGCTGGCTCAAAAAGTAG TGGCCATATTCTACAACGTGGCTCCTTCCGATGTTAGGCTTCAGAGTGGAGACTTTGGGAGGGCCTTTCAAACTACGTGC ATAGGCAAATCAGAGGATGAGAAACGGAAATGGGCGCAGGCTTTGGCCGACTTAGCGAATATGGACGGAGTGAATTCACG CAAATGGGCTAATGAAGCAAACATGTTCGAAAAAACTGACTCTGACGTTCTGGAGAAGATAGATCATAAAATATCAAATG AGTCTGGCGATATGGTTGGAGTTGAAGAACATGTTACAGACGACGGTTTTGGGTCGGGTTGGGAATCTGAGGAAGTGGAT AAAACAGTTGGGACAGCGGGTTTCATGACAAAAGGGGAAGAGATAAACGCAAGTATGGTTGCTATGCCAGTGGAGCCGTC ACATCTGTTTAAACAAGAAGGGAGAGTGATAAGATCCGGAGCGTGGAGTCCTAGCTTCCTCGATCGTATCCCCTTTGCCG AGCTTTATACTGGAGAAGTCCCAACTGCCGTTTTACAAGGGCTGGGCAATATCCGCTCAGTGCTCCAATCTAGAAGATCT ATATAA |
| AA seq | Len:1442 aa MDSLLGICAAAAIGFFTILVTLLLAFYRRFRSNRRNVTVASSSSSSSTPSSDFEAVPNGLRLRAVYIHCEETLQYTFASH LSVDFRRKRIAAFVNCDLNPDVAEGASASVVVFSKSYSSSASCLDKLVTVLRCRRNTGQMVVVPVFYGISPSDVAVRVHG SADRIREWSNALRELRELPSHQCSEESDEGQVVEEIVKDVYEKLFPTEQVGINSRLVEIEQLLCKQPWGIRRIGIWGMPG IGKTTLAKAVFDDISGGYEASCFIKHFDEAFNEKGLHRLLEEHFGKILKELPRVCSSITRPSLRGEILSKKRTLVVLDDV KNPLAAESFLGGFHWFGPGSLIIITSRDKQVYRHRQINHVYEVRSLSENEALQLLSQCAFGNDIRDQKRMELSMEVIDYA RGNPFALSFYGRELKGKKPSEMEATFLKLKLRTPYKIHDLFSSSYKTLDDNEKNIFLDIACFFVGEDVDYVMQLLDGCGF FPHVGIDVLVEKCLVTISENRVIMHRIIQDFGREIINGESVQIERRRRLWEPWTIKFLLEDDKLEANGYPRETCKRPLGT EDIEGIFLDTSSLLFDVKPTAFDNMLNLRFLKIYCSSHENQYGLGLPRGLESLPYELRLLHWENYPSESLPQEFDPCHLV ELNMSYSHLQKLWEGTKNLDMLKTCKLCYSQQLTEVDDLSKAQNIELIDLHGCTKLQRFPATGQLRHLRVVNLSGCTEIR SVPEVSPNIVELHLQGTGTRELPISLVALSQEDDLNLEKLTTLAQVVSSNQHLQKLVLLNMKDCVHLQSLPHMFHLETLE VLDLSGCSELKSIQGFPRNLKELYLVGAAVTKLPPLPRSIEVLNAHGCMSLVSIPFGFERLPRYYTFSNCFALYAQEVRE FVANGLANIERIAREHQRELKKSLAFSFTVPSAVSKNFTCDLQPGSSVMIQLGSSWRTTLGFAVLVELSFLEDYQEATGF GITCVCRWKDNEFVSHRLEKSFHCWNPEDGVPKDHMFVFCDLNMHRSTCEGNDPGILADLVVFEFFTVNKQKKPLDESCT VKKCGVHVITAANGDASCNMTQESFGNEVEEELRVVFDVLDKNDRTLFLYIACLFNDEKADFLTPLIPSTGLEISSRLKF LASNSLIHISPFGITMRHSLRQKISREIVHRQPTLGKDLIKDSTSPAWKYDVFISFSGEDDSNNKLSNLLAKFKGKLMST PHRCKSVTPELVQAIRASKGSIVLLSKSYASSSRCLDELVEIMNCNKELAQKVVAIFYNVAPSDVRLQSGDFGRAFQTTC IGKSEDEKRKWAQALADLANMDGVNSRKWANEANMFEKTDSDVLEKIDHKISNESGDMVGVEEHVTDDGFGSGWESEEVD KTVGTAGFMTKGEEINASMVAMPVEPSHLFKQEGRVIRSGAWSPSFLDRIPFAELYTGEVPTAVLQGLGNIRSVLQSRRS I* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16225 probable WRKY transcription factor 52 (A) |