Names & Information
Knowledge of Bnascaffold286G0045000WE:
| Gene Name | Bnascaffold286G0045000WE |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable disease resistance protein At4g33300 [Brassica rapa] |
| Best Hit (SwissProt) | Probable disease resistance protein At4g33300 OS=Arabidopsis thaliana GN=At4g33300 PE=2 SV=3 |
| NT seq | Len:2466 nt ATGGACGTCACCGATTTTTTCACCGGCGAAATAGCGACGGAGCTACTAAAACAGCTCGTTCTGATCTCAGCCAAAGCGTG GAAATACAAAAGCATCGCCGACAGGCTCATCATCTTGATCGAGACCATCCAGCCCACGATCCACGAGATCCAGTACAGCG GCGTGGAGCTCCCTCCACACCGCCAAGCTCAAATCGGTATGCTCGCTGGTACCTTAGAGAAAGGCAAGAAACTCACGGAG AGAGTCTTGAGCTCCCGTCGATGGAACATGTATCGACAGTTCACACTAGCGAAGAAGATGGAGAAGCTGGAGAAGACGAT ATCTGATTTTATGAAGAATCAGATATTGACTCATATCTTAGCCGATGTTCATCAGCACCGTGCTAACGCCGATGTGAGGT TTGATAGAGTTGAGAGGAGCCTCACTGGCCTCGAGGAGCAGTTGGGTTCGATGAAGATCGGAGGAGGAGGGATGATAACA GATGCGATGAAGATAGCTGAGGCTACGATGGAGATTGAGACGAGCGATGATTGTGAGAAGTTTGGGGTTGGGTTGGAGAT GGGAAAGAGGAAGGTGAAGAAGATGATGTTCAACGCTGAAGGAGGGCTTTTTGGGATTAGTGGCATGGGTGGTGTCGGTA AGACAACTCTTGCTAGAGACCTTGAACATGACAACGAAGTCCGATGTTACTTCGAGAACAGGATTTTGTTTCTGACTGTA TCACAATCCCCGATTCTTGACGAGCTGAGAACACGTATATGGGGGTTTTTAACTGGTTGTGAAAGTGTAAATAATGTTCC GGACTGGAATTTACAGTATAACGGTGGGGTTAAAACAAAGAAGCTGGTGATTCTTGATGATGTTTGGACAAGAAAAGCTT TGGACAGCTTGACTTCTAACCTTCCTAGTTGCACAATTCTTGTTGTTTCACGGTCCAAACTTGCAGATCCTAATGCTACT TATGATGTGGAAGTACTAAGGGAAGATGAAGCTATCTCTCTCTTCTGTCTCTGTGCGTTTGGTCAGAAAACTATCCCTCC TGGTTTCGACAAAGACCTTGTTAAGAAGGTTGCTGGTGAGTGTAAAGGTCTACCTTTGGCTCTCAAAGTTACGGGCGCTT CACTAAAAGACCGCCCTGAAATGTATTGGCAGGGCGCATTGCAGAGGTTATCAAAAGGTGAACCTGCTGATGAAACTCAC GAGACTAGATTGCTCCATCACATGGAAGCTAGTCTAGCAGATCTGGACGAGACAGCCAGAGAGTGTTTCTTGGATCTTGG CGCATTCCCTGAAGACAGGAAGATTCCTGTTGATATTCTCATCAACATGTGGATTGAAGTACATGATCTAGACGAGGCAG TTGCTTTTGCCACTCTTGTTGATTTGTCACACAAGAATCTCCTTACTCTTGGGAAAGATCCACGGCTTGGCTCTACGTAT GCAAGCTACTATGATGTATTTGTGACACAGCATGATGTTCTGCGAGACTTGGCACTTCATTTATCCAACAAAGGGAAAAT AAACAGAAGAAAGCGATTGCTGATGCCGAAAAGAGAGGAAAAACTTCCAAAAACATGGGGAAAGAACTGTGATGAAGAAT ACAATGCAGAGATAGTCTCTATTCATACATGGGAAATGGATGACATGGACTGGTCTGACTTTGACATGGACTTCCCTAAG GCAGAGGTTCTGTTGCTGAATTTCTCTTCAGACAAGTATGTTTTGCCTCCTTTCCTCAGCAAGATGACCCGGCTTAAGGT CCTGGTGATCATCAACAACGGCATGTCCCCTGCGATTCTCCGTGACTTTTCAATGTTTGCCAACTTGTCGAAACTAAGGA GTCTCTGGCTCGAGAGAGTTCACGTCCCTGAGCTCTACAACACAACAATCCCCATGAAACATCTCCACAAGATGTCTCTG ATTCTCTGCAAGATCAATAACAGTTTTGATCAGACCGGAGTTGACGTCTCCAGTATCTTCCCAAAGTTGGGAGACCTGAC GATAGATCACTGTGATGATCTCGTGACACTGCCTTCAAGCATTTGCAAGATGACCTCTCTCAACTCATTAAGCATAACAA ACTGTCCACGCCTCGGTGAATTGCCTAAGAACCTCAGCAAGCTACTAGCTCTTGAACTTCTGAGGCTATATGCTTGTCCC GAGCTAAAGGCGTTGCCTGATGAAATCTGTGAGCTTCCTCAGCTTAAATACCTCGACATCTCACAATGCGTCAGCATGAG TTGTCTTCCGGAGGATATAGGGAAGCTGAAGATGCTCGAGAAGATCGACATGAGAGAATGTTATATCTCTGGTAGAGTGA GGTCGGCCGTTTCGTTGGAGTCTCTGCGCCATGTGATTTGTGACAAGGACGTTACGTTTATATGGGAAGAAGTTGAGAGG GCTGTTCCAGGGTTAAAGATTGAAGCTGCTGAGAAATGTTTCAGCTTAGATTGGCTCGACGAGTAA |
| AA seq | Len:822 aa MDVTDFFTGEIATELLKQLVLISAKAWKYKSIADRLIILIETIQPTIHEIQYSGVELPPHRQAQIGMLAGTLEKGKKLTE RVLSSRRWNMYRQFTLAKKMEKLEKTISDFMKNQILTHILADVHQHRANADVRFDRVERSLTGLEEQLGSMKIGGGGMIT DAMKIAEATMEIETSDDCEKFGVGLEMGKRKVKKMMFNAEGGLFGISGMGGVGKTTLARDLEHDNEVRCYFENRILFLTV SQSPILDELRTRIWGFLTGCESVNNVPDWNLQYNGGVKTKKLVILDDVWTRKALDSLTSNLPSCTILVVSRSKLADPNAT YDVEVLREDEAISLFCLCAFGQKTIPPGFDKDLVKKVAGECKGLPLALKVTGASLKDRPEMYWQGALQRLSKGEPADETH ETRLLHHMEASLADLDETARECFLDLGAFPEDRKIPVDILINMWIEVHDLDEAVAFATLVDLSHKNLLTLGKDPRLGSTY ASYYDVFVTQHDVLRDLALHLSNKGKINRRKRLLMPKREEKLPKTWGKNCDEEYNAEIVSIHTWEMDDMDWSDFDMDFPK AEVLLLNFSSDKYVLPPFLSKMTRLKVLVIINNGMSPAILRDFSMFANLSKLRSLWLERVHVPELYNTTIPMKHLHKMSL ILCKINNSFDQTGVDVSSIFPKLGDLTIDHCDDLVTLPSSICKMTSLNSLSITNCPRLGELPKNLSKLLALELLRLYACP ELKALPDEICELPQLKYLDISQCVSMSCLPEDIGKLKMLEKIDMRECYISGRVRSAVSLESLRHVICDKDVTFIWEEVER AVPGLKIEAAEKCFSLDWLDE* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Arabidopsis broad-spectrum mildew resistance protein RPW8 |
| KEGG | disease resistance protein RPM1-like; K13457 disease resistance protein RPM1 (A) |