Names & Information
Knowledge of Bnascaffold3164G0000400GG:
| Gene Name | Bnascaffold3164G0000400GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g40030D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:2622 nt ATGGTGAGTTCTTCCTCTTCCATGGTGAAAGCTGAAGCTGAGACACCCCAAGAGCAAGTGTTTATTAACTTCCGTGGAGT TGAACTGCGCTACAACTTCGTCAGCCATCTCACCAATAACTTAAAAAGGAATGGGATCAATGCCTTCATAGACACCGATG AGGATATGGGCAAAGAGTTGAATGTTCTGCTAAAGAGAATCGAAGAGTCAAAGATCGCACTCGCAATATTCTCGCCAAGG TATACGGAGTCGGATTGGTGTTTGAAAGAGCTTGCGAAAATGAAGGAAAGAAAGGACCAAAACATGCTCGAGGTGATTCC AATCTTCTACAAGGTGAAACCTGCCACTGTTAAAAGACAGATGGGCGAGTTCGGCGATAAGTTCAGGAATCTGGTGCGGT CTATAGACAAGGAGACAAGCAACAAATGGAGTGAAGCTTTGGAAGATGTCCCTCTCTTAATGGGTTTCGAGGTGGACGAG AAAAGACTCATCAAGAGAGTCGTCAAGGAGGTGAAGAAAGTGCTGATGAAAACCCTTGCACATGCTTCTCCCAATCCCCA AAAATGTATTGCGCCGTCGTCGCCACCACAAAGAAACCAGAAAAGCCATGAAAGCTCTTGGGGAATCGAACAACGACTTA AGCAACTAGAAGAAAAGTTAAGCCACCCTCGCTACAAGGAAACAACTCGTATCATTGGTGTTGTTGGGATGCCCGGCATA GCTTATAAAGATCAACTACTCAAGACCAAAGTCTTGGTTGTTCTCGACAATGTCAGTAACAAGGAACAAATTGATGTTCT TCTTGGCGAACGCGACTGGATTGCCAAGGGAAGCAAGATTGTCATTTCAACAACCGATATATCACTGACACACAATTTGG TCAGTGATATATACGAGGTTCCTCCACTAAGCGACAGAGACGCCTTACAACACTTTATTCATTATGCATTTGATGATCAA GAAGACATTGCACTCAGGCTAGGAATTTTCTCCAAGTTGTTGAAAGATTTCGTGCATTATACAAAAGGAAATCCACTAGC TCTCAGGATATTGGGTAGAGAGCTTTCGGGGAAAGATGAGACTATCTGGGAATCAAAACTAGCTGCACTGACTCAGCATC ATAATAGCCCACCAGGAAAAAACACCAGCATGATGCTTCAAAGGGTATGGAAAGGTACTTATGATGGGCTGAGTCAAAAT CAAAAAGATACGCTCCTTGACATAGCTTGCTTCAGGTCGCTAGATGAGAATTACGTTGCCAGTTTATTGGATGCACATGG TCCATGTTCCTCTGATGCTAGGAATGTCGACATAGCAGATCTCGTGAACAAGTTTATGATTAATATTTCTTCTGGCAAAG TAGAGATGCACGATACGCTCTACATGCTCTCCAAAGAACTTGGTCAAGACGCTTCTGCTCTCGACGGGAAGGGGCGACGA AGATTGTGGCACCATCACACGATAATTGATGGAGCTTCTAAATTGAGATCTATCCTCCTTGACTTGTCTGAGGTAAAGAG AAAAACAAGCTTCCAGAGCCAAGCTTTTGCCGGGATGAGTGATCTACGATATCTCAAAATCTACAGCTCTAAGTGTCCTC AAGAATGTGATCGTGACAATAAACTAAACTTCCCAGACGGACTCCAGCTACCATTGAGTGAGGTTAGATGTTTCCATTGG TTGAAATTCCCATTGAAAGAAGTTCCAGAAGATTTCAACCCGGAGAATTTGGTTGATCTTAAGCTTCCTTACAGCGAGAT TGAACGAGTCTGGGAAGATAACAAGGTGAGCTCCATTCATTTTCTAAGACGCATCAAACTAAGATGGGTCGATTTGAACC ATTCACGGAAGTTGAGCATTTTGTCGGGTTTAGGAAAGGCTCAAAGTATTGAATACCTGAATCTTGAAGGTTGTACGGCG TTGACAAGGTTGCATGAGAATATGGAGGATATGAAGTGTCTTGTTTTCTTGAACCTGAGAGGATGCACGAGTCTCAAGTC TCTTCCATTGATTAAATTAATCTCTTTGAAAACGCTCATCCTCAGCGGCTGCTCGAAGTTTAAAGCATTTCACGTTATTT CTGATAAGCTTGAAGCTCTCTACTTGGACGGCACAAAGGTAAACGAACTTCCTGTTGAAATTGGGGTCCTCCAAAGACTT GTCTTACTGAACATGAAAGACTGCAAGAAGCTGAAAAAACTCCCTTGCAGTCTTCATGACCTGGAAGCTCTAGAACAACT TATACTCTCGGGTTGTTCAAAGCTCAAAGAGTTTCCAGAAACTGGAGGACACGTGAGCAGTTTAGAGATTCTGCTTCTGG ATGGGACGGCCATAAAGGACATACCAGATATTTTCTCGGTGCGGCGTTTATGCTTAAGCTGGAATGTAAAGATCAGCCGC CTTCCCGACCTAATCAGTCGATTTTTACGACTGCAATCGCTTGATTTGAAGCACTGTAAGAATCTTACACATGTTCCTCA GCTTCCACCAAATCTTCAGTGCTTAGATGTACGTGGCTGCAGCTCACTGAAAACAATTGCAAAACCACTGGTATGTTCTG TGCCGACGGGTCAGATCCATTCCAAGTTCATTTTCACAAACTGCAATGAACTGGAAAAAACT |
| AA seq | Len:874 aa MVSSSSSMVKAEAETPQEQVFINFRGVELRYNFVSHLTNNLKRNGINAFIDTDEDMGKELNVLLKRIEESKIALAIFSPR YTESDWCLKELAKMKERKDQNMLEVIPIFYKVKPATVKRQMGEFGDKFRNLVRSIDKETSNKWSEALEDVPLLMGFEVDE KRLIKRVVKEVKKVLMKTLAHASPNPQKCIAPSSPPQRNQKSHESSWGIEQRLKQLEEKLSHPRYKETTRIIGVVGMPGI AYKDQLLKTKVLVVLDNVSNKEQIDVLLGERDWIAKGSKIVISTTDISLTHNLVSDIYEVPPLSDRDALQHFIHYAFDDQ EDIALRLGIFSKLLKDFVHYTKGNPLALRILGRELSGKDETIWESKLAALTQHHNSPPGKNTSMMLQRVWKGTYDGLSQN QKDTLLDIACFRSLDENYVASLLDAHGPCSSDARNVDIADLVNKFMINISSGKVEMHDTLYMLSKELGQDASALDGKGRR RLWHHHTIIDGASKLRSILLDLSEVKRKTSFQSQAFAGMSDLRYLKIYSSKCPQECDRDNKLNFPDGLQLPLSEVRCFHW LKFPLKEVPEDFNPENLVDLKLPYSEIERVWEDNKVSSIHFLRRIKLRWVDLNHSRKLSILSGLGKAQSIEYLNLEGCTA LTRLHENMEDMKCLVFLNLRGCTSLKSLPLIKLISLKTLILSGCSKFKAFHVISDKLEALYLDGTKVNELPVEIGVLQRL VLLNMKDCKKLKKLPCSLHDLEALEQLILSGCSKLKEFPETGGHVSSLEILLLDGTAIKDIPDIFSVRRLCLSWNVKISR LPDLISRFLRLQSLDLKHCKNLTHVPQLPPNLQCLDVRGCSSLKTIAKPLVCSVPTGQIHSKFIFTNCNELEKT |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | - |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |