Names & Information
Knowledge of Bnascaffold3178G0000100GG:
| Gene Name | Bnascaffold3178G0000100GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaCnng39060D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:1437 nt ATGGCTTCTTCTTCATCTCTCTCTCGCAGCTGGCTGTATCACGTCTTCCTGAGCTTCCGTGGAGAAGACGTGCGCAAAGG CTTTCTTAGTCACGTTCTGAAAGAGCTCAAAAGCAAGGGAATCATACCTTTCGTTGACAACGAGATCAAGCGAGGCGAAT CTGTCGGTCCCGTGTTTGTAGGAGCCATCAGACAATCAATGGTGGCCGTTGTCTTGCTCTCCCGTAACTACGCTTCTTCA AGCTGGTGTCTGGATGAGTTAGTGGAGATCATGAAGTGCAGGAAAGATGATCAACAAACAGTGATGACCATTTTCTACGA AGTGGATCCATCTCATGTTAGGAAGCAGACCGGAGATTTCGGAAAGGCCTTTGATGAGACCTGTGTGGGAAAAACAGAAG AGGTGAAAGAGACATGGAGGAAAGCTTTGGAGGAAGTCGCGGGTATAGCTGGTTATGACTTTAGCAACTGTGGCAATGAA GCTGATTTGATCAACAAAGTTGCCTCAGATGTCTTGGCTGTGCTGGGTTTTACGCCATCAAACGACTTTGATAATTTTGT TGGCATAGGATCACAAATAACAGAGATAAAATCGAAGTTGAGCCTACAATCAGAAGAAGTTAAGGTGATTGGGATTGTGG GTCCTGCCGGGATTGGTAAAACGACCATTGCAAGAGTTTTATACGACCAACTCTCTCCTGATTTCCCATTCAGCACGTTT CTGGAGAATATCAGAGGAAGTTATGAGAAGCCTTGTGGTAACGACTATCAGTTGAAGTTGCGTTTGCAGAAACATTTGCT GTCTGAAATGTTCAACCAAAGGGATATTGAGGTTCGTCACTTAGGAGTGGCTCAAGAAATACTGAGTGGGAAAAAGGTGT TGGTTGTTCTTGACGAAGTGGATAGATGGTGGCAACTAGAGGAAATGGCAAAGCAGCGTGAATGGTTTGGTCCGGGAAGT ATTATTATCATTACAACTGAAGATAGAAAACCTCTCAAGCAACTCAAATTGGGGATCGATCATATCTACAAGATGAAATT TCCAGATATCATCGAGTCGCTTCAGATCTTCTGCCATTATGCTTTCGGTCAAAAGTCTCCAGACAATGGTTTTGAAAGGC TTACTTGGCAAGTTACTGGACTTGCTGGTAATCTTCCTATAGGCCTGAAAGTCATGGGATCATATCTACGAGGAATGTCC ATGGACTACTGGATAGAAGCACTACCAAGGCTTAGGTCTAGCCTCGACGGGGAAATTGAATCAACTCTAAGATTAAGCTA CGACGGCTTAACTGAAAAAGATAAAGCTCTTTTCCTGCATATTGCATGTTTCTTTGAATCTTCCCACGTTGATTATGTTA AAAGGTGTCTTGAAAAAGCGGTTTGGAAGTCAACCATGGGCTTCAAGTCTTATCTGATAAATCTCTTATATCTATAG |
| AA seq | Len:479 aa MASSSSLSRSWLYHVFLSFRGEDVRKGFLSHVLKELKSKGIIPFVDNEIKRGESVGPVFVGAIRQSMVAVVLLSRNYASS SWCLDELVEIMKCRKDDQQTVMTIFYEVDPSHVRKQTGDFGKAFDETCVGKTEEVKETWRKALEEVAGIAGYDFSNCGNE ADLINKVASDVLAVLGFTPSNDFDNFVGIGSQITEIKSKLSLQSEEVKVIGIVGPAGIGKTTIARVLYDQLSPDFPFSTF LENIRGSYEKPCGNDYQLKLRLQKHLLSEMFNQRDIEVRHLGVAQEILSGKKVLVVLDEVDRWWQLEEMAKQREWFGPGS IIIITTEDRKPLKQLKLGIDHIYKMKFPDIIESLQIFCHYAFGQKSPDNGFERLTWQVTGLAGNLPIGLKVMGSYLRGMS MDYWIEALPRLRSSLDGEIESTLRLSYDGLTEKDKALFLHIACFFESSHVDYVKRCLEKAVWKSTMGFKSYLINLLYL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | NB-ARC domain |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |