Names & Information

Knowledge of Bnascaffold4191G0000100GG:

Gene Name
Bnascaffold4191G0000100GG
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
BnaC09g40030D [Brassica napus]
Best Hit (SwissProt)
Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1
NT seq
Len:1038 nt

ATGAAAACCCTTGCACATGCTTCTCCCAATCCCCAAAAATGTATTGCGCCGTCGTCGCCACCACAAAGAAACCAGAAAAG
CCATGAAAGCTCTTGGGGAATCGAACAACGACTTAAGCAACTAGAAGAAAAGTTAAGCCACCCTCGCTACAAGGAAACAA
CTCGTATCATTGGTGTTGTTGGGATGCCCGGCATAGCTTATAAAGATCAACTACTCAAGACCAAAGTCTTGGTTGTTCTC
GACAATGTCAGTAACAAGGAACAAATTGATGTTCTTCTTGGCGAACGCGACTGGATTGCCAAGGGAAGCAAGATTGTCAT
TTCAACAACCGATATATCACTGACACACAATTTGGTCAGTGATATATACGAGGTTCCTCCACTAAGCGACAGAGACGCCT
TACAACACTTTATTCATTATGCATTTGATGATCAAGAAGACATTGCACTCAGGCTAGGAATTTTCTCCAAGTTGTTGAAA
GATTTCGTGCATTATACAAAAGGAAATCCACTAGCTCTCAGGATATTGGGTAGAGAGCTTTCGGGGAAAGATGAGACTAT
CTGGGAATCAAAACTAGCTGCACTGACTCAGCATCATAATAGCCCACCAGGAAAAAACACCAGCATGATGCTTCAAAGGG
TATGGAAAGGTACTTATGATGGGCTGAGTCAAAATCAAAAAGATACGCTCCTTGACATAGCTTGCTTCAGGTCGCTAGAT
GAGAATTACGTTGCCAGTTTATTGGATGCACATGGTCCATGTTCCTCTGATGCTAGGAATGTCGACATAGCAGATCTCGT
GAACAAGTTTATGATTAATATTTCTTCTGGCAAAGTAGAGATGCACGATACGCTCTACATGCTCTCCAAAGAACTTGGTC
AAGACGCTTCTGCTCTCGACGGGAAGGGGCGACGAAGATTGTGGCACCATCACACGATAATTGATGTTATAGACAAAAAT
AAGGGAGCTTCTAAATTGAGATCTATCCTCCTTGACTTGTCTGAGAACATCTCCAAGCTCATTGCGCTTTCACTCTGA
AA seq
Len:346 aa

MKTLAHASPNPQKCIAPSSPPQRNQKSHESSWGIEQRLKQLEEKLSHPRYKETTRIIGVVGMPGIAYKDQLLKTKVLVVL
DNVSNKEQIDVLLGERDWIAKGSKIVISTTDISLTHNLVSDIYEVPPLSDRDALQHFIHYAFDDQEDIALRLGIFSKLLK
DFVHYTKGNPLALRILGRELSGKDETIWESKLAALTQHHNSPPGKNTSMMLQRVWKGTYDGLSQNQKDTLLDIACFRSLD
ENYVASLLDAHGPCSSDARNVDIADLVNKFMINISSGKVEMHDTLYMLSKELGQDASALDGKGRRRLWHHHTIIDVIDKN
KGASKLRSILLDLSENISKLIALSL*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0006952
Pfam
NB-ARC domain
KEGG
hypothetical protein; K16226 disease resistance protein RPS4 (A)